Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tram1Q91V04 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Tram1Q91V04 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Gm11175-201ENSMUST00000116172 543 ntBASIC16.39■□□□□ 0.21
Tram1Q91V04 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.39■□□□□ 0.21
Tram1Q91V04 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tram1Q91V04 Grk6-206ENSMUST00000224995 2971 ntBASIC16.38■□□□□ 0.21
Tram1Q91V04 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Tram1Q91V04 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.38■□□□□ 0.21
Tram1Q91V04 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Tram1Q91V04 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.38■□□□□ 0.21
Tram1Q91V04 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.38■□□□□ 0.21
Tram1Q91V04 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Tram1Q91V04 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tram1Q91V04 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Tram1Q91V04 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.37■□□□□ 0.21
Tram1Q91V04 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Tram1Q91V04 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Tram1Q91V04 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.37■□□□□ 0.21
Tram1Q91V04 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.37■□□□□ 0.21
Tram1Q91V04 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.37■□□□□ 0.21
Tram1Q91V04 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Tram1Q91V04 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tram1Q91V04 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Tram1Q91V04 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tram1Q91V04 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Tram1Q91V04 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Tram1Q91V04 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tram1Q91V04 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.36■□□□□ 0.21
Tram1Q91V04 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Tram1Q91V04 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tram1Q91V04 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Tram1Q91V04 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.36■□□□□ 0.21
Tram1Q91V04 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tram1Q91V04 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.35■□□□□ 0.21
Tram1Q91V04 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.35■□□□□ 0.21
Tram1Q91V04 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tram1Q91V04 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tram1Q91V04 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tram1Q91V04 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tram1Q91V04 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.34■□□□□ 0.21
Tram1Q91V04 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms