Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PMFBP1Q8TBY8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC29.82■■■□□ 2.36
PMFBP1Q8TBY8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC29.82■■■□□ 2.36
PMFBP1Q8TBY8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PMFBP1Q8TBY8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
PMFBP1Q8TBY8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PMFBP1Q8TBY8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC29.81■■■□□ 2.36
PMFBP1Q8TBY8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
PMFBP1Q8TBY8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
PMFBP1Q8TBY8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC29.81■■■□□ 2.36
PMFBP1Q8TBY8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PMFBP1Q8TBY8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PMFBP1Q8TBY8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PMFBP1Q8TBY8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC29.8■■■□□ 2.36
PMFBP1Q8TBY8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
PMFBP1Q8TBY8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
PMFBP1Q8TBY8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
PMFBP1Q8TBY8 AF201337.1-201ENST00000520239 748 ntBASIC29.79■■■□□ 2.36
PMFBP1Q8TBY8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
PMFBP1Q8TBY8 AC105036.2-201ENST00000569468 176 ntBASIC29.79■■■□□ 2.36
PMFBP1Q8TBY8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PMFBP1Q8TBY8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
PMFBP1Q8TBY8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PMFBP1Q8TBY8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC29.78■■■□□ 2.36
PMFBP1Q8TBY8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC29.77■■■□□ 2.36
PMFBP1Q8TBY8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
PMFBP1Q8TBY8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
PMFBP1Q8TBY8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
PMFBP1Q8TBY8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC29.77■■■□□ 2.36
PMFBP1Q8TBY8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
PMFBP1Q8TBY8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
PMFBP1Q8TBY8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.76■■■□□ 2.35
PMFBP1Q8TBY8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
PMFBP1Q8TBY8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PMFBP1Q8TBY8 APTR-203ENST00000430801 583 ntTSL 5 BASIC29.76■■■□□ 2.35
PMFBP1Q8TBY8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
PMFBP1Q8TBY8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
PMFBP1Q8TBY8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
PMFBP1Q8TBY8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PMFBP1Q8TBY8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PMFBP1Q8TBY8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
PMFBP1Q8TBY8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PMFBP1Q8TBY8 AC010536.3-201ENST00000620306 533 ntBASIC29.75■■■□□ 2.35
PMFBP1Q8TBY8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PMFBP1Q8TBY8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC29.75■■■□□ 2.35
PMFBP1Q8TBY8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 UQCRFS1P1-201ENST00000435169 820 ntBASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 AC133041.1-202ENST00000642053 222 ntBASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC29.74■■■□□ 2.35
PMFBP1Q8TBY8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
PMFBP1Q8TBY8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
PMFBP1Q8TBY8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
PMFBP1Q8TBY8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC29.73■■■□□ 2.35
PMFBP1Q8TBY8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC29.73■■■□□ 2.35
PMFBP1Q8TBY8 AC133552.2-202ENST00000575694 574 ntBASIC29.73■■■□□ 2.35
PMFBP1Q8TBY8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC29.73■■■□□ 2.35
PMFBP1Q8TBY8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PMFBP1Q8TBY8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
PMFBP1Q8TBY8 AC010141.2-201ENST00000452426 721 ntBASIC29.72■■■□□ 2.35
PMFBP1Q8TBY8 FAM201B-201ENST00000458407 597 ntBASIC29.72■■■□□ 2.35
PMFBP1Q8TBY8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC29.72■■■□□ 2.35
PMFBP1Q8TBY8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC29.72■■■□□ 2.35
PMFBP1Q8TBY8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
PMFBP1Q8TBY8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
PMFBP1Q8TBY8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC29.71■■■□□ 2.35
PMFBP1Q8TBY8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC29.71■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms