Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 LINC00565-201ENST00000562710 2331 ntBASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH20Q8N6Y1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDH20Q8N6Y1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH20Q8N6Y1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH20Q8N6Y1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PCDH20Q8N6Y1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH20Q8N6Y1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH20Q8N6Y1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDH20Q8N6Y1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH20Q8N6Y1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
PCDH20Q8N6Y1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 C1orf229-201ENST00000623686 2258 ntBASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH20Q8N6Y1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 AL162430.1-201ENST00000480705 870 ntBASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 KRT18P14-201ENST00000534205 1250 ntBASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 DUX4L2-201ENST00000561772 1275 ntBASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 DUX4L6-201ENST00000626483 1275 ntBASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 DUX4L1-201ENST00000627662 1275 ntBASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 DUX4L8-201ENST00000629013 1275 ntBASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 DUX4L3-201ENST00000630187 1275 ntBASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 DUX4L7-201ENST00000630678 1275 ntBASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 DUX4L5-201ENST00000630834 1275 ntBASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDH20Q8N6Y1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH20Q8N6Y1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 OR7E47P-201ENST00000546390 1422 ntBASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH20Q8N6Y1 ESRRAP2-201ENST00000418437 1549 ntBASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 AC137767.1-201ENST00000602918 1920 ntBASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH20Q8N6Y1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 LINC00526-201ENST00000581067 1875 ntBASIC21.9■■□□□ 1.1
PCDH20Q8N6Y1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms