Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nucks1Q80XU3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nucks1Q80XU3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.33■□□□□ 0.84
Nucks1Q80XU3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nucks1Q80XU3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nucks1Q80XU3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nucks1Q80XU3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nucks1Q80XU3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nucks1Q80XU3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nucks1Q80XU3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Nucks1Q80XU3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nucks1Q80XU3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nucks1Q80XU3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nucks1Q80XU3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.31■□□□□ 0.84
Nucks1Q80XU3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nucks1Q80XU3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nucks1Q80XU3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nucks1Q80XU3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nucks1Q80XU3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nucks1Q80XU3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nucks1Q80XU3 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Mir7075-201ENSMUST00000184187 82 ntBASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nucks1Q80XU3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Nucks1Q80XU3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
Nucks1Q80XU3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms