Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.42■■□□□ 1.18
DENND4AQ7Z401 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DENND4AQ7Z401 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
DENND4AQ7Z401 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DENND4AQ7Z401 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.41■■□□□ 1.18
DENND4AQ7Z401 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
DENND4AQ7Z401 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.39■■□□□ 1.18
DENND4AQ7Z401 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.18
DENND4AQ7Z401 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.39■■□□□ 1.18
DENND4AQ7Z401 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
DENND4AQ7Z401 EEF1DP3-203ENST00000566025 782 ntBASIC22.39■■□□□ 1.18
DENND4AQ7Z401 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.39■■□□□ 1.18
DENND4AQ7Z401 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.39■■□□□ 1.18
DENND4AQ7Z401 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.39■■□□□ 1.18
DENND4AQ7Z401 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DENND4AQ7Z401 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
DENND4AQ7Z401 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DENND4AQ7Z401 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
DENND4AQ7Z401 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.39■■□□□ 1.17
DENND4AQ7Z401 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.39■■□□□ 1.17
DENND4AQ7Z401 RARRES2P4-201ENST00000514074 484 ntBASIC22.39■■□□□ 1.17
DENND4AQ7Z401 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.39■■□□□ 1.17
DENND4AQ7Z401 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
DENND4AQ7Z401 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DENND4AQ7Z401 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DENND4AQ7Z401 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
DENND4AQ7Z401 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
DENND4AQ7Z401 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.38■■□□□ 1.17
DENND4AQ7Z401 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DENND4AQ7Z401 LINC01960-201ENST00000563759 1884 ntBASIC22.38■■□□□ 1.17
DENND4AQ7Z401 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.38■■□□□ 1.17
DENND4AQ7Z401 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.37■■□□□ 1.17
DENND4AQ7Z401 AL034346.1-201ENST00000568244 1277 ntBASIC22.37■■□□□ 1.17
DENND4AQ7Z401 AC016405.3-201ENST00000607710 860 ntBASIC22.37■■□□□ 1.17
DENND4AQ7Z401 PRORSD1P-201ENST00000295112 541 ntBASIC22.36■■□□□ 1.17
DENND4AQ7Z401 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DENND4AQ7Z401 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DENND4AQ7Z401 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.36■■□□□ 1.17
DENND4AQ7Z401 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.36■■□□□ 1.17
DENND4AQ7Z401 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.36■■□□□ 1.17
DENND4AQ7Z401 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
DENND4AQ7Z401 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
DENND4AQ7Z401 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.36■■□□□ 1.17
DENND4AQ7Z401 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
DENND4AQ7Z401 AP004607.7-201ENST00000527152 1677 ntBASIC22.35■■□□□ 1.17
DENND4AQ7Z401 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DENND4AQ7Z401 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms