Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cln3Q61124 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cln3Q61124 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cln3Q61124 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cln3Q61124 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cln3Q61124 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cln3Q61124 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.04■□□□□ 0.96
Cln3Q61124 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cln3Q61124 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cln3Q61124 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
Cln3Q61124 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cln3Q61124 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cln3Q61124 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cln3Q61124 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.04■□□□□ 0.96
Cln3Q61124 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cln3Q61124 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cln3Q61124 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cln3Q61124 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cln3Q61124 Mir6982-201ENSMUST00000184354 68 ntBASIC21.03■□□□□ 0.96
Cln3Q61124 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cln3Q61124 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cln3Q61124 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cln3Q61124 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cln3Q61124 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cln3Q61124 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cln3Q61124 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cln3Q61124 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cln3Q61124 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.02■□□□□ 0.96
Cln3Q61124 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cln3Q61124 Gm5643-201ENSMUST00000117081 966 ntBASIC21.02■□□□□ 0.96
Cln3Q61124 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.02■□□□□ 0.96
Cln3Q61124 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.02■□□□□ 0.96
Cln3Q61124 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.02■□□□□ 0.96
Cln3Q61124 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cln3Q61124 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.02■□□□□ 0.96
Cln3Q61124 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cln3Q61124 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cln3Q61124 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Cln3Q61124 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.02■□□□□ 0.95
Cln3Q61124 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cln3Q61124 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cln3Q61124 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cln3Q61124 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cln3Q61124 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cln3Q61124 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cln3Q61124 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cln3Q61124 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cln3Q61124 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21■□□□□ 0.95
Cln3Q61124 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cln3Q61124 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21■□□□□ 0.95
Cln3Q61124 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cln3Q61124 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cln3Q61124 Dio3-201ENSMUST00000097228 1449 ntBASIC21■□□□□ 0.95
Cln3Q61124 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cln3Q61124 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21■□□□□ 0.95
Cln3Q61124 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cln3Q61124 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cln3Q61124 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cln3Q61124 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cln3Q61124 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cln3Q61124 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cln3Q61124 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Cln3Q61124 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.99■□□□□ 0.95
Cln3Q61124 Gm2559-201ENSMUST00000201323 363 ntBASIC20.99■□□□□ 0.95
Cln3Q61124 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cln3Q61124 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cln3Q61124 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cln3Q61124 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cln3Q61124 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cln3Q61124 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cln3Q61124 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.98■□□□□ 0.95
Cln3Q61124 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cln3Q61124 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cln3Q61124 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cln3Q61124 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cln3Q61124 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cln3Q61124 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cln3Q61124 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cln3Q61124 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cln3Q61124 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cln3Q61124 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cln3Q61124 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cln3Q61124 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cln3Q61124 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Cln3Q61124 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cln3Q61124 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cln3Q61124 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cln3Q61124 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cln3Q61124 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cln3Q61124 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cln3Q61124 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cln3Q61124 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cln3Q61124 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cln3Q61124 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cln3Q61124 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cln3Q61124 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cln3Q61124 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.95■□□□□ 0.94
Cln3Q61124 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cln3Q61124 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cln3Q61124 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms