Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam196aQ3USH1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam196aQ3USH1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam196aQ3USH1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Fam196aQ3USH1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Fam196aQ3USH1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Fam196aQ3USH1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Fam196aQ3USH1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.2■□□□□ 0.66
Fam196aQ3USH1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam196aQ3USH1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam196aQ3USH1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam196aQ3USH1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Fam196aQ3USH1 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.2■□□□□ 0.66
Fam196aQ3USH1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.19■□□□□ 0.66
Fam196aQ3USH1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Fam196aQ3USH1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam196aQ3USH1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam196aQ3USH1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam196aQ3USH1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.18■□□□□ 0.66
Fam196aQ3USH1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Fam196aQ3USH1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam196aQ3USH1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam196aQ3USH1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Fam196aQ3USH1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam196aQ3USH1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Fam196aQ3USH1 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.17■□□□□ 0.66
Fam196aQ3USH1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam196aQ3USH1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Fam196aQ3USH1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Fam196aQ3USH1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Fam196aQ3USH1 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.17■□□□□ 0.66
Fam196aQ3USH1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Fam196aQ3USH1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Fam196aQ3USH1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.15■□□□□ 0.66
Fam196aQ3USH1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam196aQ3USH1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam196aQ3USH1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.15■□□□□ 0.66
Fam196aQ3USH1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Fam196aQ3USH1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Fam196aQ3USH1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam196aQ3USH1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Fam196aQ3USH1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Fam196aQ3USH1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.14■□□□□ 0.65
Fam196aQ3USH1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms