Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLDN17P56750 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
CLDN17P56750 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN17P56750 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.22■□□□□ 0.67
CLDN17P56750 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN17P56750 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN17P56750 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.22■□□□□ 0.67
CLDN17P56750 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN17P56750 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLDN17P56750 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN17P56750 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN17P56750 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN17P56750 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN17P56750 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN17P56750 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN17P56750 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN17P56750 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN17P56750 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN17P56750 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN17P56750 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN17P56750 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN17P56750 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN17P56750 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN17P56750 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN17P56750 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CLDN17P56750 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN17P56750 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLDN17P56750 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN17P56750 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN17P56750 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN17P56750 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN17P56750 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN17P56750 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN17P56750 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN17P56750 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CLDN17P56750 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CLDN17P56750 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN17P56750 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN17P56750 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN17P56750 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN17P56750 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN17P56750 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN17P56750 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN17P56750 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN17P56750 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CLDN17P56750 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLDN17P56750 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN17P56750 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 C11orf96-202ENST00000528572 1834 ntBASIC19.19■□□□□ 0.66
CLDN17P56750 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLDN17P56750 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN17P56750 AC105265.2-201ENST00000467189 838 ntBASIC19.19■□□□□ 0.66
CLDN17P56750 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN17P56750 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN17P56750 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN17P56750 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLDN17P56750 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN17P56750 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN17P56750 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN17P56750 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN17P56750 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 SMUG1P1-201ENST00000590640 811 ntBASIC19.18■□□□□ 0.66
CLDN17P56750 AC105233.4-201ENST00000642045 216 ntBASIC19.18■□□□□ 0.66
CLDN17P56750 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN17P56750 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLDN17P56750 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN17P56750 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN17P56750 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN17P56750 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN17P56750 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN17P56750 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN17P56750 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN17P56750 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN17P56750 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN17P56750 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN17P56750 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN17P56750 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN17P56750 MIR572-201ENST00000384983 95 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms