Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.81■■□□□ 1.08
WNT3AP56704 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
WNT3AP56704 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.81■■□□□ 1.08
WNT3AP56704 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
WNT3AP56704 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.81■■□□□ 1.08
WNT3AP56704 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.81■■□□□ 1.08
WNT3AP56704 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
WNT3AP56704 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
WNT3AP56704 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.81■■□□□ 1.08
WNT3AP56704 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
WNT3AP56704 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
WNT3AP56704 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
WNT3AP56704 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
WNT3AP56704 FAM99A-202ENST00000538190 1989 ntBASIC21.81■■□□□ 1.08
WNT3AP56704 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
WNT3AP56704 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
WNT3AP56704 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
WNT3AP56704 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
WNT3AP56704 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.8■■□□□ 1.08
WNT3AP56704 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
WNT3AP56704 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.8■■□□□ 1.08
WNT3AP56704 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.8■■□□□ 1.08
WNT3AP56704 AC142381.2-201ENST00000566120 298 ntBASIC21.8■■□□□ 1.08
WNT3AP56704 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.8■■□□□ 1.08
WNT3AP56704 AC005837.3-201ENST00000612163 286 ntBASIC21.8■■□□□ 1.08
WNT3AP56704 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.8■■□□□ 1.08
WNT3AP56704 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
WNT3AP56704 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.79■■□□□ 1.08
WNT3AP56704 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 SMUG1P1-201ENST00000590640 811 ntBASIC21.79■■□□□ 1.08
WNT3AP56704 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
WNT3AP56704 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.79■■□□□ 1.08
WNT3AP56704 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.79■■□□□ 1.08
WNT3AP56704 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
WNT3AP56704 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
WNT3AP56704 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
WNT3AP56704 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
WNT3AP56704 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
WNT3AP56704 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
WNT3AP56704 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
WNT3AP56704 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
WNT3AP56704 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
WNT3AP56704 MIR638-201ENST00000385237 100 ntBASIC21.77■■□□□ 1.08
WNT3AP56704 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.77■■□□□ 1.08
WNT3AP56704 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
WNT3AP56704 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.77■■□□□ 1.08
WNT3AP56704 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
WNT3AP56704 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.77■■□□□ 1.08
WNT3AP56704 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
WNT3AP56704 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
WNT3AP56704 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
WNT3AP56704 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.77■■□□□ 1.07
WNT3AP56704 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.77■■□□□ 1.07
WNT3AP56704 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
WNT3AP56704 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
WNT3AP56704 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
WNT3AP56704 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
WNT3AP56704 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.76■■□□□ 1.07
WNT3AP56704 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.76■■□□□ 1.07
WNT3AP56704 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.76■■□□□ 1.07
WNT3AP56704 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.76■■□□□ 1.07
WNT3AP56704 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.76■■□□□ 1.07
WNT3AP56704 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.76■■□□□ 1.07
WNT3AP56704 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
WNT3AP56704 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
WNT3AP56704 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
WNT3AP56704 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
WNT3AP56704 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
WNT3AP56704 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.75■■□□□ 1.07
WNT3AP56704 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.75■■□□□ 1.07
WNT3AP56704 AP004607.7-201ENST00000527152 1677 ntBASIC21.75■■□□□ 1.07
WNT3AP56704 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.75■■□□□ 1.07
WNT3AP56704 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
WNT3AP56704 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
WNT3AP56704 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
WNT3AP56704 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
WNT3AP56704 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
WNT3AP56704 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
WNT3AP56704 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.74■■□□□ 1.07
WNT3AP56704 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
WNT3AP56704 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms