Protein–RNA interactions for Protein: P43027

Gdf5, Growth/differentiation factor 5, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf5P43027 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gdf5P43027 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gdf5P43027 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gdf5P43027 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gdf5P43027 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gdf5P43027 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gdf5P43027 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Gdf5P43027 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.27■□□□□ 0.68
Gdf5P43027 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.27■□□□□ 0.68
Gdf5P43027 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gdf5P43027 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Gdf5P43027 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gdf5P43027 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gdf5P43027 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gdf5P43027 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Gdf5P43027 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gdf5P43027 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gdf5P43027 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gdf5P43027 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gdf5P43027 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gdf5P43027 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gdf5P43027 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gdf5P43027 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.26■□□□□ 0.67
Gdf5P43027 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gdf5P43027 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gdf5P43027 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gdf5P43027 Gm42569-201ENSMUST00000200539 472 ntBASIC19.25■□□□□ 0.67
Gdf5P43027 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.25■□□□□ 0.67
Gdf5P43027 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gdf5P43027 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gdf5P43027 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gdf5P43027 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gdf5P43027 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf5P43027 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.24■□□□□ 0.67
Gdf5P43027 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.24■□□□□ 0.67
Gdf5P43027 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf5P43027 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf5P43027 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf5P43027 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf5P43027 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf5P43027 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gdf5P43027 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gdf5P43027 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf5P43027 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf5P43027 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf5P43027 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gdf5P43027 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.23■□□□□ 0.67
Gdf5P43027 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf5P43027 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf5P43027 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gdf5P43027 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Gm13534-201ENSMUST00000121169 513 ntBASIC19.22■□□□□ 0.67
Gdf5P43027 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.22■□□□□ 0.67
Gdf5P43027 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gdf5P43027 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gdf5P43027 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf5P43027 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Gdf5P43027 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf5P43027 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.21■□□□□ 0.67
Gdf5P43027 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.21■□□□□ 0.67
Gdf5P43027 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf5P43027 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf5P43027 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gdf5P43027 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf5P43027 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gdf5P43027 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gdf5P43027 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf5P43027 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gdf5P43027 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf5P43027 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf5P43027 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf5P43027 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gdf5P43027 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf5P43027 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.2■□□□□ 0.66
Gdf5P43027 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf5P43027 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gdf5P43027 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf5P43027 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf5P43027 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf5P43027 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.19■□□□□ 0.66
Gdf5P43027 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Gdf5P43027 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.19■□□□□ 0.66
Gdf5P43027 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf5P43027 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf5P43027 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.19■□□□□ 0.66
Gdf5P43027 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf5P43027 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gdf5P43027 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gdf5P43027 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gdf5P43027 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gdf5P43027 Gm27405-201ENSMUST00000184201 112 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms