Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.82■□□□□ 0.12
Hmx3P42581 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hmx3P42581 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.82■□□□□ 0.12
Hmx3P42581 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hmx3P42581 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.82■□□□□ 0.12
Hmx3P42581 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmx3P42581 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmx3P42581 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmx3P42581 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hmx3P42581 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hmx3P42581 Etf1-202ENSMUST00000180351 108 ntBASIC15.81■□□□□ 0.12
Hmx3P42581 Gm7417-201ENSMUST00000192950 473 ntBASIC15.81■□□□□ 0.12
Hmx3P42581 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmx3P42581 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.81■□□□□ 0.12
Hmx3P42581 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmx3P42581 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmx3P42581 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.8■□□□□ 0.12
Hmx3P42581 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmx3P42581 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.79■□□□□ 0.12
Hmx3P42581 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Gm7143-201ENSMUST00000222811 859 ntBASIC15.79■□□□□ 0.12
Hmx3P42581 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Hmx3P42581 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.79■□□□□ 0.12
Hmx3P42581 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.79■□□□□ 0.12
Hmx3P42581 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmx3P42581 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmx3P42581 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmx3P42581 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.78■□□□□ 0.12
Hmx3P42581 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmx3P42581 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmx3P42581 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hmx3P42581 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.78■□□□□ 0.12
Hmx3P42581 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmx3P42581 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.78■□□□□ 0.12
Hmx3P42581 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmx3P42581 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmx3P42581 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmx3P42581 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmx3P42581 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.78■□□□□ 0.12
Hmx3P42581 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmx3P42581 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.77■□□□□ 0.12
Hmx3P42581 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Hmx3P42581 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Gm9959-201ENSMUST00000068277 390 ntBASIC15.77■□□□□ 0.12
Hmx3P42581 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmx3P42581 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Hmx3P42581 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmx3P42581 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmx3P42581 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hmx3P42581 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hmx3P42581 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hmx3P42581 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms