Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VimP20152 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VimP20152 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VimP20152 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VimP20152 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VimP20152 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VimP20152 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
VimP20152 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VimP20152 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VimP20152 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VimP20152 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VimP20152 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VimP20152 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VimP20152 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VimP20152 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VimP20152 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VimP20152 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VimP20152 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
VimP20152 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VimP20152 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VimP20152 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VimP20152 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VimP20152 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VimP20152 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.37■□□□□ 0.69
VimP20152 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VimP20152 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VimP20152 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VimP20152 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.37■□□□□ 0.69
VimP20152 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.37■□□□□ 0.69
VimP20152 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VimP20152 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VimP20152 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
VimP20152 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VimP20152 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VimP20152 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VimP20152 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VimP20152 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VimP20152 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.36■□□□□ 0.69
VimP20152 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VimP20152 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Gm14523-201ENSMUST00000117260 558 ntBASIC19.36■□□□□ 0.69
VimP20152 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VimP20152 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VimP20152 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VimP20152 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.35■□□□□ 0.69
VimP20152 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Mir6236-201ENSMUST00000184437 123 ntBASIC19.35■□□□□ 0.69
VimP20152 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.35■□□□□ 0.69
VimP20152 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VimP20152 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.35■□□□□ 0.69
VimP20152 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.34■□□□□ 0.69
VimP20152 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.34■□□□□ 0.69
VimP20152 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VimP20152 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
VimP20152 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VimP20152 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VimP20152 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.34■□□□□ 0.69
VimP20152 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
VimP20152 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.33■□□□□ 0.69
VimP20152 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VimP20152 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
VimP20152 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
VimP20152 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VimP20152 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
VimP20152 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VimP20152 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms