Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IghmP01872 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IghmP01872 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IghmP01872 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IghmP01872 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
IghmP01872 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IghmP01872 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IghmP01872 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
IghmP01872 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Mir7075-201ENSMUST00000184187 82 ntBASIC17.87■□□□□ 0.45
IghmP01872 Gm43173-201ENSMUST00000202246 593 ntBASIC17.87■□□□□ 0.45
IghmP01872 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.87■□□□□ 0.45
IghmP01872 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.87■□□□□ 0.45
IghmP01872 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.87■□□□□ 0.45
IghmP01872 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
IghmP01872 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
IghmP01872 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IghmP01872 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
IghmP01872 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
IghmP01872 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
IghmP01872 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IghmP01872 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
IghmP01872 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.86■□□□□ 0.45
IghmP01872 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IghmP01872 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IghmP01872 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IghmP01872 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
IghmP01872 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IghmP01872 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IghmP01872 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
IghmP01872 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
IghmP01872 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
IghmP01872 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.85■□□□□ 0.45
IghmP01872 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IghmP01872 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IghmP01872 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.85■□□□□ 0.45
IghmP01872 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IghmP01872 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Gm11421-201ENSMUST00000122124 294 ntBASIC17.84■□□□□ 0.45
IghmP01872 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IghmP01872 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
IghmP01872 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IghmP01872 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
IghmP01872 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IghmP01872 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
IghmP01872 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IghmP01872 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IghmP01872 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
IghmP01872 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IghmP01872 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.83■□□□□ 0.44
IghmP01872 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IghmP01872 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.83■□□□□ 0.44
IghmP01872 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IghmP01872 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IghmP01872 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
IghmP01872 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IghmP01872 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IghmP01872 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
IghmP01872 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IghmP01872 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IghmP01872 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
IghmP01872 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IghmP01872 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
IghmP01872 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
IghmP01872 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.81■□□□□ 0.44
IghmP01872 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
IghmP01872 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IghmP01872 Gm7860-201ENSMUST00000121190 879 ntBASIC17.81■□□□□ 0.44
IghmP01872 Gm8493-201ENSMUST00000196881 489 ntBASIC17.81■□□□□ 0.44
IghmP01872 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IghmP01872 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
IghmP01872 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
IghmP01872 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IghmP01872 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms