Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.94■■□□□ 1.1
PDGFBP01127 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.94■■□□□ 1.1
PDGFBP01127 AC010331.1-201ENST00000611423 582 ntBASIC21.94■■□□□ 1.1
PDGFBP01127 AC008694.1-202ENST00000636953 945 ntBASIC21.94■■□□□ 1.1
PDGFBP01127 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.94■■□□□ 1.1
PDGFBP01127 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDGFBP01127 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDGFBP01127 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.93■■□□□ 1.1
PDGFBP01127 FAM210CP-201ENST00000445714 574 ntBASIC21.93■■□□□ 1.1
PDGFBP01127 AC091874.3-201ENST00000512672 1195 ntBASIC21.93■■□□□ 1.1
PDGFBP01127 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.93■■□□□ 1.1
PDGFBP01127 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.93■■□□□ 1.1
PDGFBP01127 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.93■■□□□ 1.1
PDGFBP01127 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.93■■□□□ 1.1
PDGFBP01127 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.93■■□□□ 1.1
PDGFBP01127 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFBP01127 AC145676.1-201ENST00000514988 2004 ntBASIC21.92■■□□□ 1.1
PDGFBP01127 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFBP01127 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFBP01127 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFBP01127 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PDGFBP01127 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PDGFBP01127 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFBP01127 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.92■■□□□ 1.1
PDGFBP01127 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFBP01127 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.92■■□□□ 1.1
PDGFBP01127 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.92■■□□□ 1.1
PDGFBP01127 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.92■■□□□ 1.1
PDGFBP01127 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDGFBP01127 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.92■■□□□ 1.1
PDGFBP01127 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFBP01127 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PDGFBP01127 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFBP01127 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFBP01127 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PDGFBP01127 AC026366.1-201ENST00000488803 879 ntBASIC21.91■■□□□ 1.1
PDGFBP01127 AC007322.4-201ENST00000509611 723 ntBASIC21.91■■□□□ 1.1
PDGFBP01127 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PDGFBP01127 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.91■■□□□ 1.1
PDGFBP01127 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.91■■□□□ 1.1
PDGFBP01127 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.91■■□□□ 1.1
PDGFBP01127 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.91■■□□□ 1.1
PDGFBP01127 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.91■■□□□ 1.1
PDGFBP01127 AC069236.1-201ENST00000604339 616 ntBASIC21.91■■□□□ 1.1
PDGFBP01127 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFBP01127 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFBP01127 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.91■■□□□ 1.1
PDGFBP01127 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDGFBP01127 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PDGFBP01127 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDGFBP01127 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDGFBP01127 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDGFBP01127 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.9■■□□□ 1.1
PDGFBP01127 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.9■■□□□ 1.1
PDGFBP01127 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDGFBP01127 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDGFBP01127 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.9■■□□□ 1.1
PDGFBP01127 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PDGFBP01127 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDGFBP01127 AL353803.4-201ENST00000565882 1934 ntBASIC21.9■■□□□ 1.1
PDGFBP01127 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.9■■□□□ 1.1
PDGFBP01127 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDGFBP01127 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.89■■□□□ 1.09
PDGFBP01127 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDGFBP01127 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.89■■□□□ 1.09
PDGFBP01127 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.89■■□□□ 1.09
PDGFBP01127 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.89■■□□□ 1.09
PDGFBP01127 AC073912.3-201ENST00000624414 853 ntBASIC21.89■■□□□ 1.09
PDGFBP01127 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.89■■□□□ 1.09
PDGFBP01127 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.89■■□□□ 1.09
PDGFBP01127 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDGFBP01127 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFBP01127 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PDGFBP01127 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PDGFBP01127 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFBP01127 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
PDGFBP01127 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.88■■□□□ 1.09
PDGFBP01127 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFBP01127 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFBP01127 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.88■■□□□ 1.09
PDGFBP01127 AC022211.4-201ENST00000625094 2161 ntBASIC21.88■■□□□ 1.09
PDGFBP01127 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFBP01127 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFBP01127 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFBP01127 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFBP01127 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.87■■□□□ 1.09
PDGFBP01127 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFBP01127 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFBP01127 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFBP01127 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFBP01127 AC211429.1-201ENST00000415277 523 ntBASIC21.87■■□□□ 1.09
PDGFBP01127 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PDGFBP01127 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
PDGFBP01127 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFBP01127 UNC93B5-201ENST00000530315 699 ntBASIC21.87■■□□□ 1.09
PDGFBP01127 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.87■■□□□ 1.09
PDGFBP01127 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.87■■□□□ 1.09
PDGFBP01127 AL359736.2-201ENST00000621992 437 ntBASIC21.87■■□□□ 1.09
PDGFBP01127 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFBP01127 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms