Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
GGPS1O95749 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.27■■□□□ 1.48
GGPS1O95749 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
GGPS1O95749 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.26■■□□□ 1.47
GGPS1O95749 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
GGPS1O95749 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
GGPS1O95749 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.26■■□□□ 1.47
GGPS1O95749 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.26■■□□□ 1.47
GGPS1O95749 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
GGPS1O95749 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
GGPS1O95749 ID1-201ENST00000376105 1233 ntBASIC24.26■■□□□ 1.47
GGPS1O95749 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.26■■□□□ 1.47
GGPS1O95749 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
GGPS1O95749 CDCA4P2-201ENST00000441182 718 ntBASIC24.26■■□□□ 1.47
GGPS1O95749 RAP2CP1-201ENST00000605103 478 ntBASIC24.26■■□□□ 1.47
GGPS1O95749 AC104187.1-201ENST00000607510 612 ntBASIC24.26■■□□□ 1.47
GGPS1O95749 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.26■■□□□ 1.47
GGPS1O95749 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.26■■□□□ 1.47
GGPS1O95749 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
GGPS1O95749 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
GGPS1O95749 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
GGPS1O95749 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
GGPS1O95749 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
GGPS1O95749 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
GGPS1O95749 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
GGPS1O95749 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.25■■□□□ 1.47
GGPS1O95749 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
GGPS1O95749 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.25■■□□□ 1.47
GGPS1O95749 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.25■■□□□ 1.47
GGPS1O95749 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
GGPS1O95749 AC055733.4-201ENST00000638462 1354 ntBASIC24.25■■□□□ 1.47
GGPS1O95749 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
GGPS1O95749 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.25■■□□□ 1.47
GGPS1O95749 AP004607.7-201ENST00000527152 1677 ntBASIC24.24■■□□□ 1.47
GGPS1O95749 LINC00526-201ENST00000581067 1875 ntBASIC24.24■■□□□ 1.47
GGPS1O95749 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
GGPS1O95749 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
GGPS1O95749 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.24■■□□□ 1.47
GGPS1O95749 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.24■■□□□ 1.47
GGPS1O95749 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.24■■□□□ 1.47
GGPS1O95749 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.24■■□□□ 1.47
GGPS1O95749 OR7E47P-201ENST00000546390 1422 ntBASIC24.24■■□□□ 1.47
GGPS1O95749 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
GGPS1O95749 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
GGPS1O95749 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
GGPS1O95749 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.23■■□□□ 1.47
GGPS1O95749 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
GGPS1O95749 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
GGPS1O95749 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
GGPS1O95749 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
GGPS1O95749 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
GGPS1O95749 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
GGPS1O95749 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
GGPS1O95749 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
GGPS1O95749 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
GGPS1O95749 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
GGPS1O95749 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
GGPS1O95749 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
GGPS1O95749 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
GGPS1O95749 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
GGPS1O95749 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
GGPS1O95749 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
GGPS1O95749 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
GGPS1O95749 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
GGPS1O95749 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
GGPS1O95749 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.21■■□□□ 1.47
GGPS1O95749 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.21■■□□□ 1.47
GGPS1O95749 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
GGPS1O95749 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.21■■□□□ 1.47
GGPS1O95749 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
GGPS1O95749 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
GGPS1O95749 KRT18P11-201ENST00000435214 1283 ntBASIC24.21■■□□□ 1.47
GGPS1O95749 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.21■■□□□ 1.47
GGPS1O95749 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.21■■□□□ 1.47
GGPS1O95749 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
GGPS1O95749 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
GGPS1O95749 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.21■■□□□ 1.47
GGPS1O95749 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
GGPS1O95749 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.2■■□□□ 1.47
GGPS1O95749 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
GGPS1O95749 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
GGPS1O95749 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
GGPS1O95749 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.2■■□□□ 1.46
GGPS1O95749 AC011767.1-201ENST00000617410 1153 ntBASIC24.2■■□□□ 1.46
GGPS1O95749 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
GGPS1O95749 AC026185.1-201ENST00000445748 174 ntBASIC24.19■■□□□ 1.46
GGPS1O95749 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.19■■□□□ 1.46
GGPS1O95749 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.19■■□□□ 1.46
GGPS1O95749 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
GGPS1O95749 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
GGPS1O95749 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
GGPS1O95749 AC087742.1-201ENST00000575880 1738 ntBASIC24.18■■□□□ 1.46
GGPS1O95749 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
GGPS1O95749 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
GGPS1O95749 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
GGPS1O95749 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
GGPS1O95749 HLA-L-209ENST00000420110 1011 ntBASIC24.18■■□□□ 1.46
GGPS1O95749 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
GGPS1O95749 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.18■■□□□ 1.46
GGPS1O95749 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms