Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.93■■□□□ 1.1
PRAMEF11O60813 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF11O60813 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRAMEF11O60813 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.93■■□□□ 1.1
PRAMEF11O60813 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.93■■□□□ 1.1
PRAMEF11O60813 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF11O60813 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.92■■□□□ 1.1
PRAMEF11O60813 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PRAMEF11O60813 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PRAMEF11O60813 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF11O60813 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF11O60813 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF11O60813 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF11O60813 YBX1P1-201ENST00000445822 960 ntBASIC21.92■■□□□ 1.1
PRAMEF11O60813 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.92■■□□□ 1.1
PRAMEF11O60813 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.92■■□□□ 1.1
PRAMEF11O60813 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.92■■□□□ 1.1
PRAMEF11O60813 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF11O60813 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRAMEF11O60813 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.92■■□□□ 1.1
PRAMEF11O60813 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.92■■□□□ 1.1
PRAMEF11O60813 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 AC009237.3-201ENST00000393279 1427 ntBASIC21.91■■□□□ 1.1
PRAMEF11O60813 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.91■■□□□ 1.1
PRAMEF11O60813 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.91■■□□□ 1.1
PRAMEF11O60813 AC123595.1-201ENST00000440769 1046 ntBASIC21.91■■□□□ 1.1
PRAMEF11O60813 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PRAMEF11O60813 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.91■■□□□ 1.1
PRAMEF11O60813 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRAMEF11O60813 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
PRAMEF11O60813 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF11O60813 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF11O60813 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF11O60813 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.9■■□□□ 1.1
PRAMEF11O60813 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.9■■□□□ 1.1
PRAMEF11O60813 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF11O60813 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF11O60813 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.9■■□□□ 1.1
PRAMEF11O60813 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF11O60813 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRAMEF11O60813 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.89■■□□□ 1.1
PRAMEF11O60813 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
PRAMEF11O60813 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.89■■□□□ 1.1
PRAMEF11O60813 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PRAMEF11O60813 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF11O60813 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.89■■□□□ 1.09
PRAMEF11O60813 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.89■■□□□ 1.09
PRAMEF11O60813 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF11O60813 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF11O60813 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRAMEF11O60813 AC005224.4-201ENST00000583262 1652 ntBASIC21.88■■□□□ 1.09
PRAMEF11O60813 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF11O60813 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.88■■□□□ 1.09
PRAMEF11O60813 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF11O60813 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PRAMEF11O60813 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.88■■□□□ 1.09
PRAMEF11O60813 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRAMEF11O60813 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.88■■□□□ 1.09
PRAMEF11O60813 EP400NL-214ENST00000641289 2402 ntBASIC21.88■■□□□ 1.09
PRAMEF11O60813 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PRAMEF11O60813 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PRAMEF11O60813 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.88■■□□□ 1.09
PRAMEF11O60813 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF11O60813 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF11O60813 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.87■■□□□ 1.09
PRAMEF11O60813 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF11O60813 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF11O60813 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PRAMEF11O60813 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.87■■□□□ 1.09
PRAMEF11O60813 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PRAMEF11O60813 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.87■■□□□ 1.09
PRAMEF11O60813 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF11O60813 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRAMEF11O60813 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PRAMEF11O60813 LINC02228-203ENST00000641970 1355 ntBASIC21.87■■□□□ 1.09
PRAMEF11O60813 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF11O60813 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PRAMEF11O60813 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PRAMEF11O60813 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PRAMEF11O60813 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF11O60813 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.86■■□□□ 1.09
PRAMEF11O60813 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.86■■□□□ 1.09
PRAMEF11O60813 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF11O60813 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.86■■□□□ 1.09
PRAMEF11O60813 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PRAMEF11O60813 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF11O60813 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRAMEF11O60813 AC055733.4-201ENST00000638462 1354 ntBASIC21.86■■□□□ 1.09
PRAMEF11O60813 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 AP006587.3-201ENST00000525742 1516 ntBASIC21.85■■□□□ 1.09
PRAMEF11O60813 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
PRAMEF11O60813 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms