Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN6O43657 AC087742.1-201ENST00000575880 1738 ntBASIC21.55■■□□□ 1.04
TSPAN6O43657 AC004854.2-201ENST00000608450 1441 ntBASIC21.55■■□□□ 1.04
TSPAN6O43657 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN6O43657 LINC00526-201ENST00000581067 1875 ntBASIC21.54■■□□□ 1.04
TSPAN6O43657 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN6O43657 KRT18P61-201ENST00000585825 1298 ntBASIC21.54■■□□□ 1.04
TSPAN6O43657 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN6O43657 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN6O43657 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.54■■□□□ 1.04
TSPAN6O43657 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN6O43657 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TSPAN6O43657 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN6O43657 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN6O43657 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN6O43657 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TSPAN6O43657 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN6O43657 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN6O43657 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TSPAN6O43657 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.53■■□□□ 1.04
TSPAN6O43657 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.53■■□□□ 1.04
TSPAN6O43657 KRT19P1-201ENST00000405746 1186 ntBASIC21.53■■□□□ 1.04
TSPAN6O43657 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.53■■□□□ 1.04
TSPAN6O43657 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.53■■□□□ 1.04
TSPAN6O43657 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN6O43657 AP004607.7-201ENST00000527152 1677 ntBASIC21.53■■□□□ 1.04
TSPAN6O43657 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN6O43657 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN6O43657 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN6O43657 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TSPAN6O43657 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.52■■□□□ 1.04
TSPAN6O43657 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN6O43657 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN6O43657 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.52■■□□□ 1.04
TSPAN6O43657 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.52■■□□□ 1.04
TSPAN6O43657 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN6O43657 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TSPAN6O43657 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN6O43657 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TSPAN6O43657 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TSPAN6O43657 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.51■■□□□ 1.03
TSPAN6O43657 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN6O43657 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.51■■□□□ 1.03
TSPAN6O43657 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.51■■□□□ 1.03
TSPAN6O43657 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN6O43657 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.51■■□□□ 1.03
TSPAN6O43657 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.51■■□□□ 1.03
TSPAN6O43657 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN6O43657 AC137767.1-201ENST00000602918 1920 ntBASIC21.51■■□□□ 1.03
TSPAN6O43657 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN6O43657 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN6O43657 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.5■■□□□ 1.03
TSPAN6O43657 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.5■■□□□ 1.03
TSPAN6O43657 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN6O43657 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.5■■□□□ 1.03
TSPAN6O43657 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN6O43657 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.5■■□□□ 1.03
TSPAN6O43657 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN6O43657 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN6O43657 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN6O43657 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN6O43657 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN6O43657 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN6O43657 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN6O43657 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN6O43657 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN6O43657 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.49■■□□□ 1.03
TSPAN6O43657 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.49■■□□□ 1.03
TSPAN6O43657 AC004911.1-201ENST00000416316 871 ntBASIC21.49■■□□□ 1.03
TSPAN6O43657 AC137761.2-201ENST00000561729 223 ntBASIC21.49■■□□□ 1.03
TSPAN6O43657 AC145350.3-201ENST00000569033 163 ntBASIC21.49■■□□□ 1.03
TSPAN6O43657 KRT87P-202ENST00000534226 1464 ntBASIC21.49■■□□□ 1.03
TSPAN6O43657 AC133561.1-201ENST00000568600 2415 ntBASIC21.49■■□□□ 1.03
TSPAN6O43657 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TSPAN6O43657 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.49■■□□□ 1.03
TSPAN6O43657 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN6O43657 AC055733.4-201ENST00000638462 1354 ntBASIC21.48■■□□□ 1.03
TSPAN6O43657 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN6O43657 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN6O43657 AC016769.1-201ENST00000409132 1010 ntBASIC21.48■■□□□ 1.03
TSPAN6O43657 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.48■■□□□ 1.03
TSPAN6O43657 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.48■■□□□ 1.03
TSPAN6O43657 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.48■■□□□ 1.03
TSPAN6O43657 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN6O43657 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.48■■□□□ 1.03
TSPAN6O43657 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN6O43657 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
TSPAN6O43657 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN6O43657 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN6O43657 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.48■■□□□ 1.03
TSPAN6O43657 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN6O43657 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.47■■□□□ 1.03
TSPAN6O43657 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TSPAN6O43657 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN6O43657 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN6O43657 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.47■■□□□ 1.03
TSPAN6O43657 AC006015.1-201ENST00000429970 570 ntBASIC21.47■■□□□ 1.03
TSPAN6O43657 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.47■■□□□ 1.03
TSPAN6O43657 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.47■■□□□ 1.03
TSPAN6O43657 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms