Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Matn3O35701 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.28■□□□□ 0.36
Matn3O35701 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Matn3O35701 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Matn3O35701 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.28■□□□□ 0.36
Matn3O35701 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Matn3O35701 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.28■□□□□ 0.36
Matn3O35701 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Matn3O35701 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Matn3O35701 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Matn3O35701 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Matn3O35701 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Matn3O35701 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Matn3O35701 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Matn3O35701 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Matn3O35701 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.27■□□□□ 0.36
Matn3O35701 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.27■□□□□ 0.36
Matn3O35701 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Matn3O35701 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Matn3O35701 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.27■□□□□ 0.36
Matn3O35701 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.27■□□□□ 0.35
Matn3O35701 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Matn3O35701 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Matn3O35701 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Matn3O35701 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Matn3O35701 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Matn3O35701 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Matn3O35701 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Matn3O35701 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.26■□□□□ 0.35
Matn3O35701 Gm45102-201ENSMUST00000207427 857 ntBASIC17.26■□□□□ 0.35
Matn3O35701 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.26■□□□□ 0.35
Matn3O35701 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn3O35701 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn3O35701 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn3O35701 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.26■□□□□ 0.35
Matn3O35701 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn3O35701 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn3O35701 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Matn3O35701 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn3O35701 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Matn3O35701 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.26■□□□□ 0.35
Matn3O35701 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.26■□□□□ 0.35
Matn3O35701 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.25■□□□□ 0.35
Matn3O35701 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Matn3O35701 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Matn3O35701 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn3O35701 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn3O35701 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn3O35701 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn3O35701 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn3O35701 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn3O35701 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Matn3O35701 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Matn3O35701 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Matn3O35701 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Matn3O35701 AA386476-201ENSMUST00000098781 1665 ntBASIC17.24■□□□□ 0.35
Matn3O35701 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Matn3O35701 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Matn3O35701 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Matn3O35701 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.24■□□□□ 0.35
Matn3O35701 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Matn3O35701 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Matn3O35701 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Matn3O35701 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.24■□□□□ 0.35
Matn3O35701 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Matn3O35701 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Matn3O35701 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Matn3O35701 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Matn3O35701 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Matn3O35701 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Matn3O35701 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Matn3O35701 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.22■□□□□ 0.35
Matn3O35701 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Matn3O35701 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.22■□□□□ 0.35
Matn3O35701 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Matn3O35701 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Matn3O35701 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Matn3O35701 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms