Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.55■□□□□ 0.56
Npc1O35604 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1O35604 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1O35604 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1O35604 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1O35604 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1O35604 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1O35604 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1O35604 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1O35604 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1O35604 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1O35604 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1O35604 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.54■□□□□ 0.56
Npc1O35604 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1O35604 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Npc1O35604 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1O35604 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1O35604 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Npc1O35604 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Npc1O35604 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.53■□□□□ 0.56
Npc1O35604 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Npc1O35604 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1O35604 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1O35604 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1O35604 Gm26571-201ENSMUST00000181399 666 ntBASIC18.53■□□□□ 0.56
Npc1O35604 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.53■□□□□ 0.56
Npc1O35604 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.53■□□□□ 0.56
Npc1O35604 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1O35604 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1O35604 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1O35604 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1O35604 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1O35604 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1O35604 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1O35604 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Npc1O35604 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1O35604 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.52■□□□□ 0.56
Npc1O35604 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1O35604 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1O35604 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Npc1O35604 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Npc1O35604 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Npc1O35604 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.51■□□□□ 0.55
Npc1O35604 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1O35604 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1O35604 Reep4-203ENSMUST00000226563 1444 ntBASIC18.51■□□□□ 0.55
Npc1O35604 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Npc1O35604 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.51■□□□□ 0.55
Npc1O35604 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.51■□□□□ 0.55
Npc1O35604 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.51■□□□□ 0.55
Npc1O35604 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Npc1O35604 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1O35604 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.51■□□□□ 0.55
Npc1O35604 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.51■□□□□ 0.55
Npc1O35604 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1O35604 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Npc1O35604 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1O35604 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1O35604 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Npc1O35604 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1O35604 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Npc1O35604 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.5■□□□□ 0.55
Npc1O35604 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Npc1O35604 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1O35604 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1O35604 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npc1O35604 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Npc1O35604 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Npc1O35604 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Npc1O35604 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Npc1O35604 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npc1O35604 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.48■□□□□ 0.55
Npc1O35604 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.48■□□□□ 0.55
Npc1O35604 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.48■□□□□ 0.55
Npc1O35604 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Npc1O35604 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Npc1O35604 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npc1O35604 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1O35604 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1O35604 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms