Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Smim17A0A504 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smim17A0A504 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.3■□□□□ 0.36
Smim17A0A504 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim17A0A504 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smim17A0A504 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim17A0A504 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim17A0A504 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.3■□□□□ 0.36
Smim17A0A504 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim17A0A504 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim17A0A504 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Smim17A0A504 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim17A0A504 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim17A0A504 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim17A0A504 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smim17A0A504 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.29■□□□□ 0.36
Smim17A0A504 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smim17A0A504 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.29■□□□□ 0.36
Smim17A0A504 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.29■□□□□ 0.36
Smim17A0A504 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim17A0A504 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smim17A0A504 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.28■□□□□ 0.36
Smim17A0A504 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.28■□□□□ 0.36
Smim17A0A504 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smim17A0A504 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim17A0A504 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smim17A0A504 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Smim17A0A504 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smim17A0A504 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smim17A0A504 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smim17A0A504 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Smim17A0A504 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smim17A0A504 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smim17A0A504 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smim17A0A504 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smim17A0A504 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smim17A0A504 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smim17A0A504 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Smim17A0A504 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smim17A0A504 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.26■□□□□ 0.35
Smim17A0A504 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smim17A0A504 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.25■□□□□ 0.35
Smim17A0A504 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smim17A0A504 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.25■□□□□ 0.35
Smim17A0A504 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.25■□□□□ 0.35
Smim17A0A504 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.24■□□□□ 0.35
Smim17A0A504 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.24■□□□□ 0.35
Smim17A0A504 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smim17A0A504 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.24■□□□□ 0.35
Smim17A0A504 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms