Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm12918-201ENSMUST00000120234 636 ntBASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm15710-201ENSMUST00000121821 636 ntBASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Mir5133-201ENSMUST00000174955 77 ntBASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm5075-201ENSMUST00000196916 622 ntBASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.52■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Igkv5-43A0A0B4J1J2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gm6211-202ENSMUST00000167849 925 ntBASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Igkv5-43A0A0B4J1J2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.48■□□□□ 0.71
Igkv5-43A0A0B4J1J2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Igkv5-43A0A0B4J1J2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Igkv5-43A0A0B4J1J2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.48■□□□□ 0.71
Igkv5-43A0A0B4J1J2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms