Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF6Q9Y252 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF6Q9Y252 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF6Q9Y252 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF6Q9Y252 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF6Q9Y252 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF6Q9Y252 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF6Q9Y252 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF6Q9Y252 AL353803.4-201ENST00000565882 1934 ntBASIC20.25■□□□□ 0.83
RNF6Q9Y252 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF6Q9Y252 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF6Q9Y252 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF6Q9Y252 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF6Q9Y252 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF6Q9Y252 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RNF6Q9Y252 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF6Q9Y252 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF6Q9Y252 RASA4CP-201ENST00000424092 1398 ntBASIC20.24■□□□□ 0.83
RNF6Q9Y252 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF6Q9Y252 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF6Q9Y252 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF6Q9Y252 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF6Q9Y252 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
RNF6Q9Y252 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF6Q9Y252 AC011298.3-201ENST00000615796 283 ntBASIC20.24■□□□□ 0.83
RNF6Q9Y252 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF6Q9Y252 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
RNF6Q9Y252 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF6Q9Y252 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF6Q9Y252 AC026310.3-201ENST00000625186 2373 ntBASIC20.23■□□□□ 0.83
RNF6Q9Y252 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF6Q9Y252 AL138724.1-201ENST00000606771 1088 ntBASIC20.23■□□□□ 0.83
RNF6Q9Y252 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF6Q9Y252 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF6Q9Y252 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF6Q9Y252 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF6Q9Y252 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF6Q9Y252 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF6Q9Y252 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF6Q9Y252 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RNF6Q9Y252 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF6Q9Y252 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF6Q9Y252 AC027682.1-201ENST00000562846 899 ntBASIC20.22■□□□□ 0.83
RNF6Q9Y252 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF6Q9Y252 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF6Q9Y252 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RNF6Q9Y252 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF6Q9Y252 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF6Q9Y252 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF6Q9Y252 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF6Q9Y252 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF6Q9Y252 AC087742.1-201ENST00000575880 1738 ntBASIC20.22■□□□□ 0.83
RNF6Q9Y252 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF6Q9Y252 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF6Q9Y252 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 AC008764.7-201ENST00000593779 1081 ntBASIC20.21■□□□□ 0.83
RNF6Q9Y252 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 MIR6821-201ENST00000617625 74 ntBASIC20.21■□□□□ 0.83
RNF6Q9Y252 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF6Q9Y252 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF6Q9Y252 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF6Q9Y252 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF6Q9Y252 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RNF6Q9Y252 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF6Q9Y252 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF6Q9Y252 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF6Q9Y252 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF6Q9Y252 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RNF6Q9Y252 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.2■□□□□ 0.82
RNF6Q9Y252 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF6Q9Y252 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF6Q9Y252 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF6Q9Y252 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF6Q9Y252 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF6Q9Y252 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF6Q9Y252 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 C17orf82-201ENST00000623772 1530 ntBASIC20.19■□□□□ 0.82
RNF6Q9Y252 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF6Q9Y252 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF6Q9Y252 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF6Q9Y252 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF6Q9Y252 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF6Q9Y252 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms