Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VPS29Q9UBQ0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS29Q9UBQ0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS29Q9UBQ0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
VPS29Q9UBQ0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS29Q9UBQ0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS29Q9UBQ0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS29Q9UBQ0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS29Q9UBQ0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS29Q9UBQ0 AC010542.4-201ENST00000563151 1910 ntBASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 FAM99A-202ENST00000538190 1989 ntBASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 OR7E47P-201ENST00000546390 1422 ntBASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 AL136116.3-201ENST00000402907 1138 ntBASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 AC010141.3-201ENST00000456659 717 ntBASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS29Q9UBQ0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS29Q9UBQ0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS29Q9UBQ0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS29Q9UBQ0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS29Q9UBQ0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.7■□□□□ 0.9
VPS29Q9UBQ0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS29Q9UBQ0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS29Q9UBQ0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
VPS29Q9UBQ0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS29Q9UBQ0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS29Q9UBQ0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS29Q9UBQ0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS29Q9UBQ0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS29Q9UBQ0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS29Q9UBQ0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VPS29Q9UBQ0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VPS29Q9UBQ0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
VPS29Q9UBQ0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS29Q9UBQ0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS29Q9UBQ0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 PKD1P6-201ENST00000343738 4769 ntBASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 AC131212.1-201ENST00000613771 668 ntBASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS29Q9UBQ0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 SLC47A1P1-202ENST00000449666 945 ntBASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 AP005435.1-201ENST00000529293 1178 ntBASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 AC007375.3-201ENST00000600936 2314 ntBASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS29Q9UBQ0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS29Q9UBQ0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
VPS29Q9UBQ0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS29Q9UBQ0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
VPS29Q9UBQ0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS29Q9UBQ0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS29Q9UBQ0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS29Q9UBQ0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
VPS29Q9UBQ0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
VPS29Q9UBQ0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS29Q9UBQ0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS29Q9UBQ0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms