Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.69■□□□□ 0.74
Ddx47Q9CWX9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx47Q9CWX9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx47Q9CWX9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx47Q9CWX9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx47Q9CWX9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx47Q9CWX9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx47Q9CWX9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ddx47Q9CWX9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ddx47Q9CWX9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx47Q9CWX9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx47Q9CWX9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx47Q9CWX9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx47Q9CWX9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx47Q9CWX9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx47Q9CWX9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx47Q9CWX9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx47Q9CWX9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ddx47Q9CWX9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx47Q9CWX9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx47Q9CWX9 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.65■□□□□ 0.74
Ddx47Q9CWX9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.65■□□□□ 0.74
Ddx47Q9CWX9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx47Q9CWX9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx47Q9CWX9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx47Q9CWX9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ddx47Q9CWX9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ddx47Q9CWX9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ddx47Q9CWX9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx47Q9CWX9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx47Q9CWX9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.64■□□□□ 0.73
Ddx47Q9CWX9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx47Q9CWX9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx47Q9CWX9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ddx47Q9CWX9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.64■□□□□ 0.73
Ddx47Q9CWX9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx47Q9CWX9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ddx47Q9CWX9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx47Q9CWX9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.63■□□□□ 0.73
Ddx47Q9CWX9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx47Q9CWX9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx47Q9CWX9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx47Q9CWX9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ddx47Q9CWX9 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.63■□□□□ 0.73
Ddx47Q9CWX9 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ddx47Q9CWX9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Gm43566-201ENSMUST00000196851 808 ntBASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ddx47Q9CWX9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.6■□□□□ 0.73
Ddx47Q9CWX9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms