Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCGF1Q9BSM1 MIR5787-201ENST00000611784 55 ntBASIC18.03■□□□□ 0.48
PCGF1Q9BSM1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCGF1Q9BSM1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCGF1Q9BSM1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCGF1Q9BSM1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.02■□□□□ 0.48
PCGF1Q9BSM1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.02■□□□□ 0.47
PCGF1Q9BSM1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCGF1Q9BSM1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 AC233723.2-201ENST00000623798 2106 ntBASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 MIR572-201ENST00000384983 95 ntBASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCGF1Q9BSM1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCGF1Q9BSM1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18■□□□□ 0.47
PCGF1Q9BSM1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCGF1Q9BSM1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCGF1Q9BSM1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCGF1Q9BSM1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18■□□□□ 0.47
PCGF1Q9BSM1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCGF1Q9BSM1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18■□□□□ 0.47
PCGF1Q9BSM1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18■□□□□ 0.47
PCGF1Q9BSM1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCGF1Q9BSM1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCGF1Q9BSM1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCGF1Q9BSM1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18■□□□□ 0.47
PCGF1Q9BSM1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 AC097381.1-201ENST00000429019 1296 ntBASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 AC087623.3-201ENST00000607047 1098 ntBASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 MIR6821-201ENST00000617625 74 ntBASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 MIR6084-201ENST00000622012 110 ntBASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 AC087239.1-201ENST00000622671 572 ntBASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 AL358852.1-201ENST00000623174 1268 ntBASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCGF1Q9BSM1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 C1orf229-201ENST00000623686 2258 ntBASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 ESRRAP2-201ENST00000418437 1549 ntBASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 AC012414.1-201ENST00000556676 535 ntBASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF1Q9BSM1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF1Q9BSM1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms