Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.69■■□□□ 1.06
ECHDC3Q96DC8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ECHDC3Q96DC8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC3Q96DC8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC3Q96DC8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.69■■□□□ 1.06
ECHDC3Q96DC8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC3Q96DC8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ECHDC3Q96DC8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 DUX4L2-201ENST00000561772 1275 ntBASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 DUX4L6-201ENST00000626483 1275 ntBASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 DUX4L1-201ENST00000627662 1275 ntBASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 DUX4L8-201ENST00000629013 1275 ntBASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 DUX4L3-201ENST00000630187 1275 ntBASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 DUX4L7-201ENST00000630678 1275 ntBASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 DUX4L5-201ENST00000630834 1275 ntBASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 AC009237.3-201ENST00000393279 1427 ntBASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.68■■□□□ 1.06
ECHDC3Q96DC8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 AC034268.1-201ENST00000441047 882 ntBASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ECHDC3Q96DC8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 AP004607.7-201ENST00000527152 1677 ntBASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 AC005224.4-201ENST00000583262 1652 ntBASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 KRT18P14-201ENST00000534205 1250 ntBASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 AL034346.1-201ENST00000568244 1277 ntBASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.66■■□□□ 1.06
ECHDC3Q96DC8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ECHDC3Q96DC8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ECHDC3Q96DC8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ECHDC3Q96DC8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ECHDC3Q96DC8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ECHDC3Q96DC8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ECHDC3Q96DC8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.64■■□□□ 1.05
ECHDC3Q96DC8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ECHDC3Q96DC8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.64■■□□□ 1.05
ECHDC3Q96DC8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.64■■□□□ 1.05
ECHDC3Q96DC8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ECHDC3Q96DC8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.64■■□□□ 1.05
ECHDC3Q96DC8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 AC233723.2-201ENST00000623798 2106 ntBASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.63■■□□□ 1.05
ECHDC3Q96DC8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms