Protein–RNA interactions for Protein: Q92570

NR4A3, Nuclear receptor subfamily 4 group A member 3, humanhuman

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A3Q92570 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NR4A3Q92570 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR4A3Q92570 AC087742.1-201ENST00000575880 1738 ntBASIC20.3■□□□□ 0.84
NR4A3Q92570 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NR4A3Q92570 C11orf96-202ENST00000528572 1834 ntBASIC20.3■□□□□ 0.84
NR4A3Q92570 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.29■□□□□ 0.84
NR4A3Q92570 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.29■□□□□ 0.84
NR4A3Q92570 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.29■□□□□ 0.84
NR4A3Q92570 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
NR4A3Q92570 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.29■□□□□ 0.84
NR4A3Q92570 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
NR4A3Q92570 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.29■□□□□ 0.84
NR4A3Q92570 AL031602.1-201ENST00000633169 911 ntBASIC20.29■□□□□ 0.84
NR4A3Q92570 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NR4A3Q92570 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NR4A3Q92570 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A3Q92570 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.28■□□□□ 0.84
NR4A3Q92570 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A3Q92570 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A3Q92570 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A3Q92570 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A3Q92570 AC027612.3-201ENST00000413684 1047 ntBASIC20.28■□□□□ 0.84
NR4A3Q92570 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A3Q92570 DUX4L4-201ENST00000566884 1269 ntBASIC20.28■□□□□ 0.84
NR4A3Q92570 PKD1P6-201ENST00000343738 4769 ntBASIC20.28■□□□□ 0.84
NR4A3Q92570 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A3Q92570 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NR4A3Q92570 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NR4A3Q92570 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NR4A3Q92570 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NR4A3Q92570 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A3Q92570 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A3Q92570 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A3Q92570 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.27■□□□□ 0.84
NR4A3Q92570 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A3Q92570 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A3Q92570 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NR4A3Q92570 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A3Q92570 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NR4A3Q92570 KRT18P5-201ENST00000436075 1291 ntBASIC20.27■□□□□ 0.84
NR4A3Q92570 AC022517.1-201ENST00000592429 346 ntBASIC20.27■□□□□ 0.84
NR4A3Q92570 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.27■□□□□ 0.84
NR4A3Q92570 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A3Q92570 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NR4A3Q92570 AC133637.1-201ENST00000624115 1537 ntBASIC20.27■□□□□ 0.83
NR4A3Q92570 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NR4A3Q92570 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
NR4A3Q92570 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A3Q92570 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A3Q92570 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A3Q92570 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NR4A3Q92570 MIR572-201ENST00000384983 95 ntBASIC20.26■□□□□ 0.83
NR4A3Q92570 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.26■□□□□ 0.83
NR4A3Q92570 AC123595.1-201ENST00000440769 1046 ntBASIC20.26■□□□□ 0.83
NR4A3Q92570 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A3Q92570 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.26■□□□□ 0.83
NR4A3Q92570 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A3Q92570 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A3Q92570 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A3Q92570 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.25■□□□□ 0.83
NR4A3Q92570 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A3Q92570 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A3Q92570 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.25■□□□□ 0.83
NR4A3Q92570 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A3Q92570 DUX4L2-201ENST00000561772 1275 ntBASIC20.25■□□□□ 0.83
NR4A3Q92570 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
NR4A3Q92570 DUX4L6-201ENST00000626483 1275 ntBASIC20.25■□□□□ 0.83
NR4A3Q92570 DUX4L1-201ENST00000627662 1275 ntBASIC20.25■□□□□ 0.83
NR4A3Q92570 DUX4L8-201ENST00000629013 1275 ntBASIC20.25■□□□□ 0.83
NR4A3Q92570 DUX4L3-201ENST00000630187 1275 ntBASIC20.25■□□□□ 0.83
NR4A3Q92570 DUX4L7-201ENST00000630678 1275 ntBASIC20.25■□□□□ 0.83
NR4A3Q92570 DUX4L5-201ENST00000630834 1275 ntBASIC20.25■□□□□ 0.83
NR4A3Q92570 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A3Q92570 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A3Q92570 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NR4A3Q92570 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.25■□□□□ 0.83
NR4A3Q92570 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NR4A3Q92570 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A3Q92570 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NR4A3Q92570 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NR4A3Q92570 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.25■□□□□ 0.83
NR4A3Q92570 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.25■□□□□ 0.83
NR4A3Q92570 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A3Q92570 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A3Q92570 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A3Q92570 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms