Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha2Q91Y17 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha2Q91Y17 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha2Q91Y17 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha2Q91Y17 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdha2Q91Y17 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha2Q91Y17 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdha2Q91Y17 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdha2Q91Y17 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Gm18671-201ENSMUST00000214826 683 ntBASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha2Q91Y17 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
Pcdha2Q91Y17 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha2Q91Y17 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha2Q91Y17 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha2Q91Y17 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha2Q91Y17 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha2Q91Y17 AV356131-201ENSMUST00000206201 750 ntBASIC20.44■□□□□ 0.86
Pcdha2Q91Y17 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdha2Q91Y17 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha2Q91Y17 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Gm13534-201ENSMUST00000121169 513 ntBASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdha2Q91Y17 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha2Q91Y17 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha2Q91Y17 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdha2Q91Y17 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha2Q91Y17 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha2Q91Y17 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha2Q91Y17 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha2Q91Y17 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha2Q91Y17 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdha2Q91Y17 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdha2Q91Y17 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.39■□□□□ 0.86
Pcdha2Q91Y17 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Pcdha2Q91Y17 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Gm42569-201ENSMUST00000200539 472 ntBASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha2Q91Y17 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms