Protein–RNA interactions for Protein: Q8VEM1

Rnf130, E3 ubiquitin-protein ligase RNF130, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf130Q8VEM1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf130Q8VEM1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 Spcs1-204ENSMUST00000226782 949 ntBASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf130Q8VEM1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rnf130Q8VEM1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rnf130Q8VEM1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rnf130Q8VEM1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf130Q8VEM1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf130Q8VEM1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Rnf130Q8VEM1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Gm12251-201ENSMUST00000117893 792 ntBASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf130Q8VEM1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms