Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NME8Q8N427 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NME8Q8N427 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NME8Q8N427 ESRRAP2-201ENST00000418437 1549 ntBASIC23.84■■□□□ 1.41
NME8Q8N427 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NME8Q8N427 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NME8Q8N427 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NME8Q8N427 CDCA4P2-201ENST00000441182 718 ntBASIC23.83■■□□□ 1.41
NME8Q8N427 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NME8Q8N427 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.83■■□□□ 1.41
NME8Q8N427 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.83■■□□□ 1.41
NME8Q8N427 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.83■■□□□ 1.41
NME8Q8N427 RAP2CP1-201ENST00000605103 478 ntBASIC23.83■■□□□ 1.41
NME8Q8N427 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NME8Q8N427 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NME8Q8N427 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NME8Q8N427 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
NME8Q8N427 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
NME8Q8N427 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NME8Q8N427 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NME8Q8N427 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NME8Q8N427 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NME8Q8N427 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NME8Q8N427 AC073111.5-205ENST00000641717 521 ntBASIC23.82■■□□□ 1.4
NME8Q8N427 KRT87P-202ENST00000534226 1464 ntBASIC23.81■■□□□ 1.4
NME8Q8N427 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NME8Q8N427 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NME8Q8N427 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
NME8Q8N427 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.81■■□□□ 1.4
NME8Q8N427 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.81■■□□□ 1.4
NME8Q8N427 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NME8Q8N427 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.81■■□□□ 1.4
NME8Q8N427 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
NME8Q8N427 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NME8Q8N427 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NME8Q8N427 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NME8Q8N427 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
NME8Q8N427 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NME8Q8N427 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NME8Q8N427 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NME8Q8N427 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NME8Q8N427 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.8■■□□□ 1.4
NME8Q8N427 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
NME8Q8N427 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.8■■□□□ 1.4
NME8Q8N427 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.8■■□□□ 1.4
NME8Q8N427 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.8■■□□□ 1.4
NME8Q8N427 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
NME8Q8N427 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NME8Q8N427 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.79■■□□□ 1.4
NME8Q8N427 AC026185.1-201ENST00000445748 174 ntBASIC23.79■■□□□ 1.4
NME8Q8N427 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NME8Q8N427 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
NME8Q8N427 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
NME8Q8N427 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NME8Q8N427 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NME8Q8N427 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NME8Q8N427 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.78■■□□□ 1.4
NME8Q8N427 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.78■■□□□ 1.4
NME8Q8N427 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.78■■□□□ 1.4
NME8Q8N427 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
NME8Q8N427 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NME8Q8N427 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NME8Q8N427 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NME8Q8N427 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.77■■□□□ 1.4
NME8Q8N427 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NME8Q8N427 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.77■■□□□ 1.4
NME8Q8N427 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NME8Q8N427 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.77■■□□□ 1.4
NME8Q8N427 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NME8Q8N427 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.77■■□□□ 1.4
NME8Q8N427 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.77■■□□□ 1.4
NME8Q8N427 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NME8Q8N427 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.77■■□□□ 1.4
NME8Q8N427 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NME8Q8N427 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
NME8Q8N427 AC055733.4-201ENST00000638462 1354 ntBASIC23.77■■□□□ 1.4
NME8Q8N427 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
NME8Q8N427 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.76■■□□□ 1.39
NME8Q8N427 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NME8Q8N427 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
NME8Q8N427 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.76■■□□□ 1.39
NME8Q8N427 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.76■■□□□ 1.39
NME8Q8N427 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NME8Q8N427 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.76■■□□□ 1.39
NME8Q8N427 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.76■■□□□ 1.39
NME8Q8N427 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NME8Q8N427 AC104187.1-201ENST00000607510 612 ntBASIC23.76■■□□□ 1.39
NME8Q8N427 AC011767.1-201ENST00000617410 1153 ntBASIC23.76■■□□□ 1.39
NME8Q8N427 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NME8Q8N427 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.76■■□□□ 1.39
NME8Q8N427 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NME8Q8N427 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
NME8Q8N427 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NME8Q8N427 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NME8Q8N427 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.75■■□□□ 1.39
NME8Q8N427 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NME8Q8N427 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.75■■□□□ 1.39
NME8Q8N427 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.75■■□□□ 1.39
NME8Q8N427 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.75■■□□□ 1.39
NME8Q8N427 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms