Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Brat1Q8C3R1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Brat1Q8C3R1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Brat1Q8C3R1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Brat1Q8C3R1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Brat1Q8C3R1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Brat1Q8C3R1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Brat1Q8C3R1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Brat1Q8C3R1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Brat1Q8C3R1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Brat1Q8C3R1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.16■□□□□ 0.82
Brat1Q8C3R1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Brat1Q8C3R1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.16■□□□□ 0.82
Brat1Q8C3R1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brat1Q8C3R1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Brat1Q8C3R1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brat1Q8C3R1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brat1Q8C3R1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Brat1Q8C3R1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Brat1Q8C3R1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Brat1Q8C3R1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brat1Q8C3R1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brat1Q8C3R1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Brat1Q8C3R1 Gm27405-201ENSMUST00000184201 112 ntBASIC20.14■□□□□ 0.81
Brat1Q8C3R1 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.14■□□□□ 0.81
Brat1Q8C3R1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brat1Q8C3R1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Brat1Q8C3R1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.13■□□□□ 0.81
Brat1Q8C3R1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Brat1Q8C3R1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Gm7291-201ENSMUST00000199147 382 ntBASIC20.12■□□□□ 0.81
Brat1Q8C3R1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brat1Q8C3R1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Brat1Q8C3R1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brat1Q8C3R1 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.11■□□□□ 0.81
Brat1Q8C3R1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.11■□□□□ 0.81
Brat1Q8C3R1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brat1Q8C3R1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Brat1Q8C3R1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Brat1Q8C3R1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Brat1Q8C3R1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Brat1Q8C3R1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brat1Q8C3R1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brat1Q8C3R1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Brat1Q8C3R1 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.1■□□□□ 0.81
Brat1Q8C3R1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Gm7514-201ENSMUST00000209475 934 ntBASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.09■□□□□ 0.81
Brat1Q8C3R1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Brat1Q8C3R1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.08■□□□□ 0.81
Brat1Q8C3R1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Brat1Q8C3R1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms