Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup54Q8BTS4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nup54Q8BTS4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Nup54Q8BTS4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup54Q8BTS4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup54Q8BTS4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup54Q8BTS4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Nup54Q8BTS4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Nup54Q8BTS4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup54Q8BTS4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup54Q8BTS4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nup54Q8BTS4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.6■□□□□ 0.73
Nup54Q8BTS4 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.6■□□□□ 0.73
Nup54Q8BTS4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nup54Q8BTS4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Gm27405-201ENSMUST00000184201 112 ntBASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup54Q8BTS4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup54Q8BTS4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nup54Q8BTS4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup54Q8BTS4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup54Q8BTS4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nup54Q8BTS4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.58■□□□□ 0.72
Nup54Q8BTS4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nup54Q8BTS4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.58■□□□□ 0.72
Nup54Q8BTS4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.58■□□□□ 0.72
Nup54Q8BTS4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup54Q8BTS4 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.58■□□□□ 0.72
Nup54Q8BTS4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nup54Q8BTS4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup54Q8BTS4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup54Q8BTS4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nup54Q8BTS4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Nup54Q8BTS4 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.57■□□□□ 0.72
Nup54Q8BTS4 Gm7291-201ENSMUST00000199147 382 ntBASIC19.57■□□□□ 0.72
Nup54Q8BTS4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.57■□□□□ 0.72
Nup54Q8BTS4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nup54Q8BTS4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup54Q8BTS4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup54Q8BTS4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup54Q8BTS4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nup54Q8BTS4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nup54Q8BTS4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Nup54Q8BTS4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Nup54Q8BTS4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.56■□□□□ 0.72
Nup54Q8BTS4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nup54Q8BTS4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nup54Q8BTS4 Golph3-202ENSMUST00000226517 2359 ntBASIC19.56■□□□□ 0.72
Nup54Q8BTS4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Gm13534-201ENSMUST00000121169 513 ntBASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nup54Q8BTS4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Gm7514-201ENSMUST00000209475 934 ntBASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nup54Q8BTS4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms