Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Upk3bQ80YF6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.16■□□□□ 0.18
Upk3bQ80YF6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.15■□□□□ 0.18
Upk3bQ80YF6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Upk3bQ80YF6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Upk3bQ80YF6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bQ80YF6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bQ80YF6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bQ80YF6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bQ80YF6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bQ80YF6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bQ80YF6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bQ80YF6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms