Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPH1Q70E73 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.63■■□□□ 1.05
RAPH1Q70E73 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPH1Q70E73 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPH1Q70E73 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAPH1Q70E73 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPH1Q70E73 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPH1Q70E73 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPH1Q70E73 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 AC241377.3-202ENST00000626088 1088 ntBASIC21.62■■□□□ 1.05
RAPH1Q70E73 AC241585.3-202ENST00000628937 1088 ntBASIC21.62■■□□□ 1.05
RAPH1Q70E73 AC245100.8-202ENST00000629247 1058 ntBASIC21.62■■□□□ 1.05
RAPH1Q70E73 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPH1Q70E73 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAPH1Q70E73 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPH1Q70E73 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RAPH1Q70E73 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAPH1Q70E73 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPH1Q70E73 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RAPH1Q70E73 AC010542.4-201ENST00000563151 1910 ntBASIC21.61■■□□□ 1.05
RAPH1Q70E73 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPH1Q70E73 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPH1Q70E73 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RAPH1Q70E73 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPH1Q70E73 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPH1Q70E73 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RAPH1Q70E73 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPH1Q70E73 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.61■■□□□ 1.05
RAPH1Q70E73 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAPH1Q70E73 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.61■■□□□ 1.05
RAPH1Q70E73 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.6■■□□□ 1.05
RAPH1Q70E73 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAPH1Q70E73 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.6■■□□□ 1.05
RAPH1Q70E73 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.6■■□□□ 1.05
RAPH1Q70E73 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
RAPH1Q70E73 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAPH1Q70E73 FAM99A-202ENST00000538190 1989 ntBASIC21.59■■□□□ 1.05
RAPH1Q70E73 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPH1Q70E73 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAPH1Q70E73 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.59■■□□□ 1.05
RAPH1Q70E73 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RAPH1Q70E73 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPH1Q70E73 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPH1Q70E73 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPH1Q70E73 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RAPH1Q70E73 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RAPH1Q70E73 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.59■■□□□ 1.05
RAPH1Q70E73 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAPH1Q70E73 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPH1Q70E73 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAPH1Q70E73 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
RAPH1Q70E73 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPH1Q70E73 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPH1Q70E73 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPH1Q70E73 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RAPH1Q70E73 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.58■■□□□ 1.04
RAPH1Q70E73 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RAPH1Q70E73 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAPH1Q70E73 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAPH1Q70E73 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RAPH1Q70E73 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.58■■□□□ 1.04
RAPH1Q70E73 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RAPH1Q70E73 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.57■■□□□ 1.04
RAPH1Q70E73 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPH1Q70E73 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPH1Q70E73 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPH1Q70E73 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAPH1Q70E73 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPH1Q70E73 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPH1Q70E73 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.57■■□□□ 1.04
RAPH1Q70E73 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.57■■□□□ 1.04
RAPH1Q70E73 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPH1Q70E73 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RAPH1Q70E73 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RAPH1Q70E73 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RAPH1Q70E73 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.57■■□□□ 1.04
RAPH1Q70E73 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
RAPH1Q70E73 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RAPH1Q70E73 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAPH1Q70E73 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAPH1Q70E73 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPH1Q70E73 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RAPH1Q70E73 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPH1Q70E73 AC133637.1-201ENST00000624115 1537 ntBASIC21.56■■□□□ 1.04
RAPH1Q70E73 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RAPH1Q70E73 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RAPH1Q70E73 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.56■■□□□ 1.04
RAPH1Q70E73 pRNA.6-201ENST00000610482 90 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms