Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssx9Q6XAS3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ssx9Q6XAS3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ssx9Q6XAS3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ssx9Q6XAS3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssx9Q6XAS3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ssx9Q6XAS3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ssx9Q6XAS3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssx9Q6XAS3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssx9Q6XAS3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.01■□□□□ 0.63
Ssx9Q6XAS3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssx9Q6XAS3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssx9Q6XAS3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ssx9Q6XAS3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Mir7075-201ENSMUST00000184187 82 ntBASIC19■□□□□ 0.63
Ssx9Q6XAS3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Gm43231-201ENSMUST00000202960 2258 ntBASIC19■□□□□ 0.63
Ssx9Q6XAS3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssx9Q6XAS3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ssx9Q6XAS3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssx9Q6XAS3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 BC021767-201ENSMUST00000126387 1716 ntBASIC18.97■□□□□ 0.63
Ssx9Q6XAS3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Smad6-203ENSMUST00000179458 273 ntBASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ssx9Q6XAS3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms