Protein–RNA interactions for Protein: Q6P3X3

TTC27, Tetratricopeptide repeat protein 27, humanhuman

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC27Q6P3X3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.34■■□□□ 1.17
TTC27Q6P3X3 AL117332.1-201ENST00000622628 974 ntBASIC22.34■■□□□ 1.17
TTC27Q6P3X3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC27Q6P3X3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
TTC27Q6P3X3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC27Q6P3X3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC27Q6P3X3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC27Q6P3X3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC27Q6P3X3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
TTC27Q6P3X3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.33■■□□□ 1.16
TTC27Q6P3X3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
TTC27Q6P3X3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.33■■□□□ 1.16
TTC27Q6P3X3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 AC079089.2-201ENST00000531211 1277 ntBASIC22.32■■□□□ 1.16
TTC27Q6P3X3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.32■■□□□ 1.16
TTC27Q6P3X3 AC133637.1-201ENST00000624115 1537 ntBASIC22.31■■□□□ 1.16
TTC27Q6P3X3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 MIR6724-1-201ENST00000616420 92 ntBASIC22.31■■□□□ 1.16
TTC27Q6P3X3 MIR6724-2-201ENST00000616483 92 ntBASIC22.31■■□□□ 1.16
TTC27Q6P3X3 MIR6724-4-201ENST00000617390 92 ntBASIC22.31■■□□□ 1.16
TTC27Q6P3X3 MIR6724-3-201ENST00000622482 92 ntBASIC22.31■■□□□ 1.16
TTC27Q6P3X3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
TTC27Q6P3X3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TTC27Q6P3X3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 AC241377.3-202ENST00000626088 1088 ntBASIC22.29■■□□□ 1.16
TTC27Q6P3X3 AC241585.3-202ENST00000628937 1088 ntBASIC22.29■■□□□ 1.16
TTC27Q6P3X3 AC245100.8-202ENST00000629247 1058 ntBASIC22.29■■□□□ 1.16
TTC27Q6P3X3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.29■■□□□ 1.16
TTC27Q6P3X3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.28■■□□□ 1.16
TTC27Q6P3X3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC27Q6P3X3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TTC27Q6P3X3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TTC27Q6P3X3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.28■■□□□ 1.16
TTC27Q6P3X3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TTC27Q6P3X3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.28■■□□□ 1.16
TTC27Q6P3X3 pRNA.6-201ENST00000610482 90 ntBASIC22.28■■□□□ 1.16
TTC27Q6P3X3 pRNA.5-201ENST00000612139 90 ntBASIC22.28■■□□□ 1.16
TTC27Q6P3X3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TTC27Q6P3X3 pRNA.11-201ENST00000618423 90 ntBASIC22.28■■□□□ 1.16
TTC27Q6P3X3 pRNA.13-201ENST00000619112 90 ntBASIC22.28■■□□□ 1.16
TTC27Q6P3X3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.28■■□□□ 1.16
TTC27Q6P3X3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TTC27Q6P3X3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.27■■□□□ 1.16
TTC27Q6P3X3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.27■■□□□ 1.16
TTC27Q6P3X3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.27■■□□□ 1.16
TTC27Q6P3X3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.27■■□□□ 1.16
TTC27Q6P3X3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TTC27Q6P3X3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms