Protein–RNA interactions for Protein: Q12112

TY1B-NL1, Transposon Ty1-NL1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL1Q12112 PPA2YMR267W 933 nt3.86□□□□□ -1.79
TY1B-NL1Q12112 SGS1YMR190C 4344 nt3.86□□□□□ -1.79
TY1B-NL1Q12112 YHR214C-EYHR214C-E 300 nt3.86□□□□□ -1.79
TY1B-NL1Q12112 YAR070CYAR070C 300 nt3.86□□□□□ -1.79
TY1B-NL1Q12112 CAF130YGR134W 3369 nt3.86□□□□□ -1.79
TY1B-NL1Q12112 NPR3YHL023C 3441 nt3.86□□□□□ -1.79
TY1B-NL1Q12112 RRP46YGR095C 672 nt3.85□□□□□ -1.79
TY1B-NL1Q12112 BET3YKR068C 582 nt3.85□□□□□ -1.79
TY1B-NL1Q12112 MDM30YLR368W 1797 nt3.84□□□□□ -1.79
TY1B-NL1Q12112 RAD55YDR076W 1221 nt3.84□□□□□ -1.79
TY1B-NL1Q12112 DSD1YGL196W 1287 nt3.84□□□□□ -1.79
TY1B-NL1Q12112 GRE3YHR104W 984 nt3.84□□□□□ -1.79
TY1B-NL1Q12112 TCO89YPL180W 2400 nt3.84□□□□□ -1.79
TY1B-NL1Q12112 IRC20YLR247C 4671 nt3.84□□□□□ -1.79
TY1B-NL1Q12112 ATG21YPL100W 1491 nt3.84□□□□□ -1.8
TY1B-NL1Q12112 VAC17YCL063W 1272 nt3.84□□□□□ -1.8
TY1B-NL1Q12112 YDR491CYDR491C 492 nt3.84□□□□□ -1.8
TY1B-NL1Q12112 AYR1YIL124W 894 nt3.84□□□□□ -1.8
TY1B-NL1Q12112 YIL156W-BYIL156W-B 222 nt3.84□□□□□ -1.8
TY1B-NL1Q12112 DDP1YOR163W 567 nt3.84□□□□□ -1.8
TY1B-NL1Q12112 HUL4YJR036C 2679 nt3.83□□□□□ -1.8
TY1B-NL1Q12112 PHO91YNR013C 2685 nt3.83□□□□□ -1.8
TY1B-NL1Q12112 GAT2YMR136W 1683 nt3.83□□□□□ -1.8
TY1B-NL1Q12112 YDR274CYDR274C 372 nt3.83□□□□□ -1.8
TY1B-NL1Q12112 PDE1YGL248W 1110 nt3.83□□□□□ -1.8
TY1B-NL1Q12112 YJR037WYJR037W 384 nt3.83□□□□□ -1.8
TY1B-NL1Q12112 ECM2YBR065C 1095 nt3.83□□□□□ -1.8
TY1B-NL1Q12112 HAA1YPR008W 2085 nt3.82□□□□□ -1.8
TY1B-NL1Q12112 YDL241WYDL241W 372 nt3.82□□□□□ -1.8
TY1B-NL1Q12112 YMR187CYMR187C 1296 nt3.82□□□□□ -1.8
TY1B-NL1Q12112 GIP3YPL137C 3831 nt3.82□□□□□ -1.8
TY1B-NL1Q12112 SPA2YLL021W 4401 nt3.82□□□□□ -1.8
TY1B-NL1Q12112 GRS2YPR081C 1857 nt3.81□□□□□ -1.8
TY1B-NL1Q12112 RRT13YER066W 558 nt3.81□□□□□ -1.8
TY1B-NL1Q12112 YGR121W-AYGR121W-A 216 nt3.81□□□□□ -1.8
TY1B-NL1Q12112 INP53YOR109W 3324 nt3.81□□□□□ -1.8
TY1B-NL1Q12112 ATG13YPR185W 2217 nt3.81□□□□□ -1.8
TY1B-NL1Q12112 FLO9YAL063C 3969 nt3.81□□□□□ -1.8
TY1B-NL1Q12112 EBS1YDR206W 2655 nt3.81□□□□□ -1.8
TY1B-NL1Q12112 YPT35YHR105W 645 nt3.81□□□□□ -1.8
TY1B-NL1Q12112 DNF1YER166W 4716 nt3.81□□□□□ -1.8
TY1B-NL1Q12112 ULP1YPL020C 1866 nt3.8□□□□□ -1.8
TY1B-NL1Q12112 ATP7YKL016C 525 nt3.8□□□□□ -1.8
TY1B-NL1Q12112 YPL107WYPL107W 747 nt3.8□□□□□ -1.8
TY1B-NL1Q12112 BOI1YBL085W 2943 nt3.8□□□□□ -1.8
TY1B-NL1Q12112 URA2YJL130C 6645 nt3.8□□□□□ -1.8
TY1B-NL1Q12112 RPO41YFL036W 4056 nt3.8□□□□□ -1.8
TY1B-NL1Q12112 RPS24AYER074W 408 nt3.79□□□□□ -1.8
TY1B-NL1Q12112 YGL082WYGL082W 1146 nt3.79□□□□□ -1.8
TY1B-NL1Q12112 YIP5YGL161C 933 nt3.79□□□□□ -1.8
TY1B-NL1Q12112 YHR193C-AYHR193C-A 375 nt3.79□□□□□ -1.8
TY1B-NL1Q12112 ERG11YHR007C 1593 nt3.79□□□□□ -1.8
TY1B-NL1Q12112 OCA1YNL099C 717 nt3.79□□□□□ -1.8
TY1B-NL1Q12112 DAD4YDR320C-A 219 nt3.78□□□□□ -1.8
TY1B-NL1Q12112 NAB3YPL190C 2409 nt3.78□□□□□ -1.8
TY1B-NL1Q12112 FKS3YMR306W 5358 nt3.77□□□□□ -1.81
TY1B-NL1Q12112 SNU23YDL098C 585 nt3.77□□□□□ -1.81
TY1B-NL1Q12112 IZH2YOL002C 954 nt3.77□□□□□ -1.81
TY1B-NL1Q12112 FPK1YNR047W 2682 nt3.77□□□□□ -1.81
TY1B-NL1Q12112 TMN3YER113C 2121 nt3.77□□□□□ -1.81
TY1B-NL1Q12112 MAK32YCR019W 1092 nt3.76□□□□□ -1.81
TY1B-NL1Q12112 YGR269WYGR269W 327 nt3.76□□□□□ -1.81
TY1B-NL1Q12112 HER1YOR227W 3741 nt3.76□□□□□ -1.81
TY1B-NL1Q12112 DBF2YGR092W 1719 nt3.75□□□□□ -1.81
TY1B-NL1Q12112 MSH2YOL090W 2895 nt3.75□□□□□ -1.81
TY1B-NL1Q12112 NCS2YNL119W 1482 nt3.74□□□□□ -1.81
TY1B-NL1Q12112 RPL24BYGR148C 468 nt3.74□□□□□ -1.81
TY1B-NL1Q12112 YDL109CYDL109C 1944 nt3.74□□□□□ -1.81
TY1B-NL1Q12112 RPA190YOR341W 4995 nt3.74□□□□□ -1.81
TY1B-NL1Q12112 YOR277CYOR277C 309 nt3.74□□□□□ -1.81
TY1B-NL1Q12112 RPL14BYHL001W 417 nt3.73□□□□□ -1.81
TY1B-NL1Q12112 FPR1YNL135C 345 nt3.73□□□□□ -1.81
TY1B-NL1Q12112 CEP3YMR168C 1827 nt3.72□□□□□ -1.81
TY1B-NL1Q12112 NGL3YML118W 1518 nt3.72□□□□□ -1.81
TY1B-NL1Q12112 CHS5YLR330W 2016 nt3.72□□□□□ -1.81
TY1B-NL1Q12112 MAL12YGR292W 1755 nt3.72□□□□□ -1.81
TY1B-NL1Q12112 SAP190YKR028W 3102 nt3.72□□□□□ -1.81
TY1B-NL1Q12112 CNA1YLR433C 1662 nt3.72□□□□□ -1.81
TY1B-NL1Q12112 RRP1YDR087C 837 nt3.71□□□□□ -1.81
TY1B-NL1Q12112 RTA1YGR213C 954 nt3.71□□□□□ -1.81
TY1B-NL1Q12112 GAS5YOL030W 1455 nt3.71□□□□□ -1.82
TY1B-NL1Q12112 BRR2YER172C 6492 nt3.71□□□□□ -1.82
TY1B-NL1Q12112 RSM10YDR041W 612 nt3.71□□□□□ -1.82
TY1B-NL1Q12112 DET1YDR051C 1005 nt3.71□□□□□ -1.82
TY1B-NL1Q12112 SCM4YGR049W 564 nt3.71□□□□□ -1.82
TY1B-NL1Q12112 YIL174WYIL174W 228 nt3.71□□□□□ -1.82
TY1B-NL1Q12112 YJL222W-AYJL222W-A 228 nt3.71□□□□□ -1.82
TY1B-NL1Q12112 PAU17YLL025W 375 nt3.71□□□□□ -1.82
TY1B-NL1Q12112 ARO1YDR127W 4767 nt3.7□□□□□ -1.82
TY1B-NL1Q12112 IOC2YLR095C 2439 nt3.7□□□□□ -1.82
TY1B-NL1Q12112 KAP123YER110C 3342 nt3.7□□□□□ -1.82
TY1B-NL1Q12112 YIL047C-AYIL047C-A 369 nt3.69□□□□□ -1.82
TY1B-NL1Q12112 YBR116CYBR116C 528 nt3.69□□□□□ -1.82
TY1B-NL1Q12112 UBP14YBR058C 2346 nt3.69□□□□□ -1.82
TY1B-NL1Q12112 PFF1YBR074W 2931 nt3.69□□□□□ -1.82
TY1B-NL1Q12112 YHB1YGR234W 1200 nt3.68□□□□□ -1.82
TY1B-NL1Q12112 YBL055CYBL055C 1257 nt3.68□□□□□ -1.82
TY1B-NL1Q12112 TGL1YKL140W 1647 nt3.68□□□□□ -1.82
TY1B-NL1Q12112 MST27YGL051W 705 nt3.68□□□□□ -1.82
TY1B-NL1Q12112 FLO10YKR102W 3510 nt3.67□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms