Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabpb1Q00420 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.41■□□□□ 0.7
Gabpb1Q00420 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabpb1Q00420 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabpb1Q00420 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabpb1Q00420 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Gabpb1Q00420 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabpb1Q00420 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.39■□□□□ 0.7
Gabpb1Q00420 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gabpb1Q00420 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gabpb1Q00420 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.39■□□□□ 0.69
Gabpb1Q00420 Gm26833-201ENSMUST00000180899 440 ntBASIC19.39■□□□□ 0.69
Gabpb1Q00420 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gabpb1Q00420 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.39■□□□□ 0.69
Gabpb1Q00420 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gabpb1Q00420 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gabpb1Q00420 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabpb1Q00420 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gabpb1Q00420 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gabpb1Q00420 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabpb1Q00420 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gabpb1Q00420 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gabpb1Q00420 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabpb1Q00420 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabpb1Q00420 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabpb1Q00420 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabpb1Q00420 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabpb1Q00420 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gabpb1Q00420 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.36■□□□□ 0.69
Gabpb1Q00420 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gabpb1Q00420 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.36■□□□□ 0.69
Gabpb1Q00420 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabpb1Q00420 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabpb1Q00420 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.36■□□□□ 0.69
Gabpb1Q00420 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabpb1Q00420 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gabpb1Q00420 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Gm43017-201ENSMUST00000198296 752 ntBASIC19.35■□□□□ 0.69
Gabpb1Q00420 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabpb1Q00420 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Gm15039-201ENSMUST00000118914 875 ntBASIC19.34■□□□□ 0.69
Gabpb1Q00420 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Gabpb1Q00420 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms