Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RORAP35398 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RORAP35398 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.53■□□□□ 0.88
RORAP35398 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.53■□□□□ 0.88
RORAP35398 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RORAP35398 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.53■□□□□ 0.88
RORAP35398 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.53■□□□□ 0.88
RORAP35398 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.53■□□□□ 0.88
RORAP35398 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.53■□□□□ 0.88
RORAP35398 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.53■□□□□ 0.88
RORAP35398 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.53■□□□□ 0.88
RORAP35398 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.53■□□□□ 0.88
RORAP35398 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.53■□□□□ 0.88
RORAP35398 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.53■□□□□ 0.88
RORAP35398 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.53■□□□□ 0.88
RORAP35398 AP004607.4-201ENST00000530158 1459 ntBASIC20.53■□□□□ 0.88
RORAP35398 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RORAP35398 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.53■□□□□ 0.88
RORAP35398 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.53■□□□□ 0.88
RORAP35398 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
RORAP35398 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RORAP35398 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RORAP35398 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RORAP35398 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RORAP35398 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RORAP35398 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RORAP35398 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
RORAP35398 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.52■□□□□ 0.88
RORAP35398 AC004854.2-201ENST00000608450 1441 ntBASIC20.52■□□□□ 0.87
RORAP35398 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RORAP35398 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.51■□□□□ 0.87
RORAP35398 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.51■□□□□ 0.87
RORAP35398 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
RORAP35398 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.51■□□□□ 0.87
RORAP35398 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.51■□□□□ 0.87
RORAP35398 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RORAP35398 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RORAP35398 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.51■□□□□ 0.87
RORAP35398 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
RORAP35398 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RORAP35398 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RORAP35398 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RORAP35398 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RORAP35398 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.5■□□□□ 0.87
RORAP35398 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RORAP35398 LINC01960-201ENST00000563759 1884 ntBASIC20.5■□□□□ 0.87
RORAP35398 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RORAP35398 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RORAP35398 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.5■□□□□ 0.87
RORAP35398 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RORAP35398 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RORAP35398 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
RORAP35398 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.5■□□□□ 0.87
RORAP35398 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RORAP35398 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RORAP35398 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
RORAP35398 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RORAP35398 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RORAP35398 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RORAP35398 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RORAP35398 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RORAP35398 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RORAP35398 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RORAP35398 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RORAP35398 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.49■□□□□ 0.87
RORAP35398 AC006015.1-201ENST00000429970 570 ntBASIC20.49■□□□□ 0.87
RORAP35398 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.49■□□□□ 0.87
RORAP35398 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RORAP35398 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.49■□□□□ 0.87
RORAP35398 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RORAP35398 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RORAP35398 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RORAP35398 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RORAP35398 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.49■□□□□ 0.87
RORAP35398 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RORAP35398 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RORAP35398 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.48■□□□□ 0.87
RORAP35398 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RORAP35398 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
RORAP35398 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.48■□□□□ 0.87
RORAP35398 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RORAP35398 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RORAP35398 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.47■□□□□ 0.87
RORAP35398 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RORAP35398 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.47■□□□□ 0.87
RORAP35398 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RORAP35398 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RORAP35398 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RORAP35398 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RORAP35398 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RORAP35398 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RORAP35398 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RORAP35398 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
RORAP35398 AC005224.4-201ENST00000583262 1652 ntBASIC20.46■□□□□ 0.87
RORAP35398 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RORAP35398 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.46■□□□□ 0.87
RORAP35398 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RORAP35398 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.46■□□□□ 0.87
RORAP35398 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.46■□□□□ 0.87
RORAP35398 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms