Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Aldh1a1P24549 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.61■□□□□ 0.89
Aldh1a1P24549 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Aldh1a1P24549 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Aldh1a1P24549 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Aldh1a1P24549 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Aldh1a1P24549 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aldh1a1P24549 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Aldh1a1P24549 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aldh1a1P24549 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aldh1a1P24549 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aldh1a1P24549 Gm715-201ENSMUST00000117865 831 ntBASIC20.6■□□□□ 0.89
Aldh1a1P24549 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Aldh1a1P24549 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aldh1a1P24549 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Aldh1a1P24549 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.6■□□□□ 0.89
Aldh1a1P24549 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Aldh1a1P24549 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aldh1a1P24549 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Aldh1a1P24549 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a1P24549 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a1P24549 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.58■□□□□ 0.89
Aldh1a1P24549 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.58■□□□□ 0.89
Aldh1a1P24549 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Aldh1a1P24549 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.58■□□□□ 0.89
Aldh1a1P24549 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.58■□□□□ 0.89
Aldh1a1P24549 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Aldh1a1P24549 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Aldh1a1P24549 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Aldh1a1P24549 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.57■□□□□ 0.88
Aldh1a1P24549 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Aldh1a1P24549 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a1P24549 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a1P24549 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.56■□□□□ 0.88
Aldh1a1P24549 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Aldh1a1P24549 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a1P24549 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a1P24549 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a1P24549 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aldh1a1P24549 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.55■□□□□ 0.88
Aldh1a1P24549 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a1P24549 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a1P24549 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Aldh1a1P24549 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Aldh1a1P24549 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aldh1a1P24549 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aldh1a1P24549 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Aldh1a1P24549 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Aldh1a1P24549 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.53■□□□□ 0.88
Aldh1a1P24549 Gm44549-201ENSMUST00000208351 577 ntBASIC20.53■□□□□ 0.88
Aldh1a1P24549 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms