Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.25■■□□□ 1.47
PGK1P00558 AC069152.1-201ENST00000438030 544 ntBASIC24.25■■□□□ 1.47
PGK1P00558 CNN2P6-201ENST00000439038 900 ntBASIC24.25■■□□□ 1.47
PGK1P00558 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.25■■□□□ 1.47
PGK1P00558 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.25■■□□□ 1.47
PGK1P00558 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.25■■□□□ 1.47
PGK1P00558 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PGK1P00558 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PGK1P00558 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.24■■□□□ 1.47
PGK1P00558 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.24■■□□□ 1.47
PGK1P00558 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.24■■□□□ 1.47
PGK1P00558 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PGK1P00558 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PGK1P00558 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PGK1P00558 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.24■■□□□ 1.47
PGK1P00558 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.24■■□□□ 1.47
PGK1P00558 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
PGK1P00558 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.24■■□□□ 1.47
PGK1P00558 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PGK1P00558 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PGK1P00558 AF201337.1-201ENST00000520239 748 ntBASIC24.23■■□□□ 1.47
PGK1P00558 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.23■■□□□ 1.47
PGK1P00558 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PGK1P00558 AC098934.4-201ENST00000564127 592 ntBASIC24.23■■□□□ 1.47
PGK1P00558 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PGK1P00558 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.23■■□□□ 1.47
PGK1P00558 AC055733.4-201ENST00000638462 1354 ntBASIC24.23■■□□□ 1.47
PGK1P00558 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.23■■□□□ 1.47
PGK1P00558 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.23■■□□□ 1.47
PGK1P00558 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PGK1P00558 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.23■■□□□ 1.47
PGK1P00558 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PGK1P00558 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PGK1P00558 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PGK1P00558 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PGK1P00558 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PGK1P00558 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
PGK1P00558 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
PGK1P00558 AC105036.2-201ENST00000569468 176 ntBASIC24.22■■□□□ 1.47
PGK1P00558 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PGK1P00558 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PGK1P00558 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.21■■□□□ 1.47
PGK1P00558 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PGK1P00558 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
PGK1P00558 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.21■■□□□ 1.47
PGK1P00558 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PGK1P00558 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
PGK1P00558 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
PGK1P00558 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PGK1P00558 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.21■■□□□ 1.47
PGK1P00558 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PGK1P00558 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.47
PGK1P00558 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PGK1P00558 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.2■■□□□ 1.46
PGK1P00558 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PGK1P00558 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PGK1P00558 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PGK1P00558 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PGK1P00558 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.19■■□□□ 1.46
PGK1P00558 FAM201B-201ENST00000458407 597 ntBASIC24.19■■□□□ 1.46
PGK1P00558 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PGK1P00558 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PGK1P00558 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.19■■□□□ 1.46
PGK1P00558 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.19■■□□□ 1.46
PGK1P00558 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PGK1P00558 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.19■■□□□ 1.46
PGK1P00558 AC133041.1-202ENST00000642053 222 ntBASIC24.19■■□□□ 1.46
PGK1P00558 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PGK1P00558 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PGK1P00558 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
PGK1P00558 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PGK1P00558 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PGK1P00558 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PGK1P00558 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.18■■□□□ 1.46
PGK1P00558 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.18■■□□□ 1.46
PGK1P00558 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PGK1P00558 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PGK1P00558 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.18■■□□□ 1.46
PGK1P00558 AC010536.3-201ENST00000620306 533 ntBASIC24.18■■□□□ 1.46
PGK1P00558 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
PGK1P00558 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PGK1P00558 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.18■■□□□ 1.46
PGK1P00558 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PGK1P00558 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PGK1P00558 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.17■■□□□ 1.46
PGK1P00558 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PGK1P00558 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
PGK1P00558 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.17■■□□□ 1.46
PGK1P00558 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.17■■□□□ 1.46
PGK1P00558 AC133552.2-202ENST00000575694 574 ntBASIC24.17■■□□□ 1.46
PGK1P00558 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PGK1P00558 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.17■■□□□ 1.46
PGK1P00558 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.17■■□□□ 1.46
PGK1P00558 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
PGK1P00558 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PGK1P00558 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
PGK1P00558 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.16■■□□□ 1.46
PGK1P00558 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PGK1P00558 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.16■■□□□ 1.46
PGK1P00558 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms