Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC138907.5-202ENST00000569484 235 ntBASIC32.94■■■□□ 2.86
RAPGEF3O95398 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
RAPGEF3O95398 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
RAPGEF3O95398 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
RAPGEF3O95398 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
RAPGEF3O95398 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RAPGEF3O95398 DUSP8P5-201ENST00000422884 1815 ntBASIC32.93■■■□□ 2.86
RAPGEF3O95398 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC32.93■■■□□ 2.86
RAPGEF3O95398 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC32.93■■■□□ 2.86
RAPGEF3O95398 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC32.93■■■□□ 2.86
RAPGEF3O95398 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC32.93■■■□□ 2.86
RAPGEF3O95398 OR10C1-204ENST00000622521 1039 ntBASIC32.93■■■□□ 2.86
RAPGEF3O95398 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
RAPGEF3O95398 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
RAPGEF3O95398 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC32.92■■■□□ 2.86
RAPGEF3O95398 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
RAPGEF3O95398 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC32.92■■■□□ 2.86
RAPGEF3O95398 BX276092.2-201ENST00000417668 665 ntBASIC32.92■■■□□ 2.86
RAPGEF3O95398 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC32.92■■■□□ 2.86
RAPGEF3O95398 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
RAPGEF3O95398 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC32.91■■■□□ 2.86
RAPGEF3O95398 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC32.91■■■□□ 2.86
RAPGEF3O95398 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC32.91■■■□□ 2.86
RAPGEF3O95398 USP36-216ENST00000589424 970 ntTSL 5 BASIC32.91■■■□□ 2.86
RAPGEF3O95398 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RAPGEF3O95398 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
RAPGEF3O95398 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC32.9■■■□□ 2.86
RAPGEF3O95398 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
RAPGEF3O95398 BET1L-204ENST00000410108 637 ntTSL 3 BASIC32.9■■■□□ 2.86
RAPGEF3O95398 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC32.9■■■□□ 2.86
RAPGEF3O95398 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RAPGEF3O95398 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC32.89■■■□□ 2.86
RAPGEF3O95398 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC32.89■■■□□ 2.86
RAPGEF3O95398 AL512625.2-201ENST00000417533 625 ntBASIC32.89■■■□□ 2.86
RAPGEF3O95398 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC32.89■■■□□ 2.86
RAPGEF3O95398 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
RAPGEF3O95398 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC32.89■■■□□ 2.86
RAPGEF3O95398 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC32.88■■■□□ 2.85
RAPGEF3O95398 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RAPGEF3O95398 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC32.88■■■□□ 2.85
RAPGEF3O95398 AC007322.4-201ENST00000509611 723 ntBASIC32.88■■■□□ 2.85
RAPGEF3O95398 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC32.88■■■□□ 2.85
RAPGEF3O95398 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC32.88■■■□□ 2.85
RAPGEF3O95398 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC32.88■■■□□ 2.85
RAPGEF3O95398 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC32.88■■■□□ 2.85
RAPGEF3O95398 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RAPGEF3O95398 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RAPGEF3O95398 AC022211.4-201ENST00000625094 2161 ntBASIC32.87■■■□□ 2.85
RAPGEF3O95398 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RAPGEF3O95398 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
RAPGEF3O95398 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RAPGEF3O95398 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC32.87■■■□□ 2.85
RAPGEF3O95398 AC008550.1-201ENST00000511500 884 ntBASIC32.87■■■□□ 2.85
RAPGEF3O95398 BET1L-207ENST00000529614 560 ntTSL 5 BASIC32.87■■■□□ 2.85
RAPGEF3O95398 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC32.87■■■□□ 2.85
RAPGEF3O95398 AP003733.4-201ENST00000623785 1697 ntBASIC32.87■■■□□ 2.85
RAPGEF3O95398 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC32.87■■■□□ 2.85
RAPGEF3O95398 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC32.86■■■□□ 2.85
RAPGEF3O95398 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC32.86■■■□□ 2.85
RAPGEF3O95398 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
RAPGEF3O95398 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
RAPGEF3O95398 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC32.86■■■□□ 2.85
RAPGEF3O95398 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC32.86■■■□□ 2.85
RAPGEF3O95398 AC097658.1-201ENST00000475555 843 ntBASIC32.86■■■□□ 2.85
RAPGEF3O95398 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
RAPGEF3O95398 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC32.86■■■□□ 2.85
RAPGEF3O95398 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC32.86■■■□□ 2.85
RAPGEF3O95398 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF3O95398 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF3O95398 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF3O95398 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC32.85■■■□□ 2.85
RAPGEF3O95398 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF3O95398 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC32.85■■■□□ 2.85
RAPGEF3O95398 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF3O95398 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF3O95398 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF3O95398 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC32.85■■■□□ 2.85
RAPGEF3O95398 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC32.85■■■□□ 2.85
RAPGEF3O95398 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF3O95398 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF3O95398 AL353803.4-201ENST00000565882 1934 ntBASIC32.85■■■□□ 2.85
RAPGEF3O95398 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
RAPGEF3O95398 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC32.84■■■□□ 2.85
RAPGEF3O95398 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
RAPGEF3O95398 PEX7-202ENST00000367756 680 ntTSL 3 BASIC32.84■■■□□ 2.85
RAPGEF3O95398 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC32.84■■■□□ 2.85
RAPGEF3O95398 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC32.84■■■□□ 2.85
RAPGEF3O95398 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC32.84■■■□□ 2.85
RAPGEF3O95398 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
RAPGEF3O95398 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC32.83■■■□□ 2.85
RAPGEF3O95398 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC32.83■■■□□ 2.85
RAPGEF3O95398 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
RAPGEF3O95398 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
RAPGEF3O95398 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RAPGEF3O95398 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
RAPGEF3O95398 MIR1224-201ENST00000408193 85 ntBASIC32.83■■■□□ 2.85
RAPGEF3O95398 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
RAPGEF3O95398 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC32.83■■■□□ 2.85
RAPGEF3O95398 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC32.83■■■□□ 2.85
RAPGEF3O95398 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms