Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NKX2-8O15522 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-8O15522 DUSP8P5-201ENST00000422884 1815 ntBASIC20.11■□□□□ 0.81
NKX2-8O15522 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-8O15522 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-8O15522 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-8O15522 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NKX2-8O15522 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-8O15522 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-8O15522 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.1■□□□□ 0.81
NKX2-8O15522 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-8O15522 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.1■□□□□ 0.81
NKX2-8O15522 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NKX2-8O15522 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-8O15522 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-8O15522 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-8O15522 MIR4651-201ENST00000582622 73 ntBASIC20.1■□□□□ 0.81
NKX2-8O15522 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.1■□□□□ 0.81
NKX2-8O15522 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NKX2-8O15522 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-8O15522 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NKX2-8O15522 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-8O15522 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NKX2-8O15522 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-8O15522 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
NKX2-8O15522 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-8O15522 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-8O15522 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-8O15522 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.09■□□□□ 0.81
NKX2-8O15522 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-8O15522 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-8O15522 AC055733.4-201ENST00000638462 1354 ntBASIC20.08■□□□□ 0.81
NKX2-8O15522 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
NKX2-8O15522 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.08■□□□□ 0.81
NKX2-8O15522 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-8O15522 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-8O15522 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.08■□□□□ 0.81
NKX2-8O15522 CNN2P6-201ENST00000439038 900 ntBASIC20.08■□□□□ 0.81
NKX2-8O15522 AF201337.1-201ENST00000520239 748 ntBASIC20.08■□□□□ 0.81
NKX2-8O15522 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.08■□□□□ 0.81
NKX2-8O15522 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NKX2-8O15522 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NKX2-8O15522 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NKX2-8O15522 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
NKX2-8O15522 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-8O15522 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-8O15522 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
NKX2-8O15522 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-8O15522 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-8O15522 AC069152.1-201ENST00000438030 544 ntBASIC20.07■□□□□ 0.8
NKX2-8O15522 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-8O15522 AC105036.2-201ENST00000569468 176 ntBASIC20.07■□□□□ 0.8
NKX2-8O15522 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-8O15522 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-8O15522 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
NKX2-8O15522 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NKX2-8O15522 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NKX2-8O15522 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-8O15522 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
NKX2-8O15522 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-8O15522 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-8O15522 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.06■□□□□ 0.8
NKX2-8O15522 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-8O15522 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-8O15522 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-8O15522 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-8O15522 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-8O15522 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-8O15522 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-8O15522 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.05■□□□□ 0.8
NKX2-8O15522 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-8O15522 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-8O15522 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-8O15522 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NKX2-8O15522 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.05■□□□□ 0.8
NKX2-8O15522 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.05■□□□□ 0.8
NKX2-8O15522 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.05■□□□□ 0.8
NKX2-8O15522 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NKX2-8O15522 AC133041.1-202ENST00000642053 222 ntBASIC20.05■□□□□ 0.8
NKX2-8O15522 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
NKX2-8O15522 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-8O15522 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-8O15522 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-8O15522 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.04■□□□□ 0.8
NKX2-8O15522 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.04■□□□□ 0.8
NKX2-8O15522 FAM201B-201ENST00000458407 597 ntBASIC20.04■□□□□ 0.8
NKX2-8O15522 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.04■□□□□ 0.8
NKX2-8O15522 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-8O15522 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-8O15522 AC010536.3-201ENST00000620306 533 ntBASIC20.04■□□□□ 0.8
NKX2-8O15522 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-8O15522 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NKX2-8O15522 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-8O15522 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.03■□□□□ 0.8
NKX2-8O15522 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-8O15522 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.03■□□□□ 0.8
NKX2-8O15522 AC079089.2-201ENST00000531211 1277 ntBASIC20.03■□□□□ 0.8
NKX2-8O15522 AC098934.4-201ENST00000564127 592 ntBASIC20.03■□□□□ 0.8
NKX2-8O15522 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.03■□□□□ 0.8
NKX2-8O15522 AC133552.2-202ENST00000575694 574 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms