Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 LIME1-210ENST00000621325 2410 ntTSL 223.76■■□□□ 1.399e-8■■□□□ 13.9
NKRFO15226 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.239e-8■■□□□ 13.9
NKRFO15226 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.36■□□□□ 0.539e-8■■□□□ 13.9
NKRFO15226 RHBDF2-216ENST00000592123 935 ntTSL 525.59■■□□□ 1.698e-7■■□□□ 13.9
NKRFO15226 RHBDF2-218ENST00000593103 562 ntTSL 522.76■■□□□ 1.238e-7■■□□□ 13.9
NKRFO15226 RHBDF2-208ENST00000590288 734 ntTSL 422.68■■□□□ 1.228e-7■■□□□ 13.9
NKRFO15226 RHBDF2-203ENST00000585989 568 ntTSL 422.65■■□□□ 1.228e-7■■□□□ 13.9
NKRFO15226 RHBDF2-212ENST00000591697 613 ntTSL 422.41■■□□□ 1.188e-7■■□□□ 13.9
NKRFO15226 RHBDF2-217ENST00000592378 533 ntTSL 421.18■□□□□ 0.988e-7■■□□□ 13.9
NKRFO15226 RHBDF2-211ENST00000591255 545 ntTSL 420.4■□□□□ 0.868e-7■■□□□ 13.9
NKRFO15226 RHBDF2-201ENST00000313080 3582 ntTSL 1 (best) BASIC12.2□□□□□ -0.468e-7■■□□□ 13.9
NKRFO15226 RHBDF2-215ENST00000591885 3599 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.478e-7■■□□□ 13.9
NKRFO15226 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.14■■□□□ 1.132e-6■■□□□ 13.9
NKRFO15226 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 12e-6■■□□□ 13.9
NKRFO15226 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.2■□□□□ 0.52e-6■■□□□ 13.9
NKRFO15226 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.63■■□□□ 1.531e-6■■□□□ 13.9
NKRFO15226 HNF4A-207ENST00000609262 540 ntTSL 1 (best)20.57■□□□□ 0.881e-6■■□□□ 13.9
NKRFO15226 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.4■□□□□ 0.861e-6■■□□□ 13.9
NKRFO15226 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)20.16■□□□□ 0.821e-6■■□□□ 13.9
NKRFO15226 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.43■□□□□ 0.381e-6■■□□□ 13.9
NKRFO15226 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.9□□□□□ -0.021e-6■■□□□ 13.9
NKRFO15226 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.18□□□□□ -0.141e-6■■□□□ 13.9
NKRFO15226 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC11.36□□□□□ -0.591e-6■■□□□ 13.9
NKRFO15226 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.631e-6■■□□□ 13.9
NKRFO15226 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.58■■■□□ 2.012e-7■■□□□ 13.8
NKRFO15226 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.752e-7■■□□□ 13.8
NKRFO15226 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.632e-7■■□□□ 13.8
NKRFO15226 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.472e-7■■□□□ 13.8
NKRFO15226 AKT1-217ENST00000557494 408 ntTSL 225.5■■□□□ 1.671e-7■■□□□ 13.8
NKRFO15226 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.185e-6■■□□□ 13.8
NKRFO15226 CDC34-202ENST00000586283 1147 ntTSL 320.72■□□□□ 0.915e-6■■□□□ 13.8
NKRFO15226 CDC34-207ENST00000607527 357 ntTSL 515.94■□□□□ 0.145e-6■■□□□ 13.8
NKRFO15226 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.121e-6■■□□□ 13.8
NKRFO15226 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.971e-6■■□□□ 13.8
NKRFO15226 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.487e-7■■□□□ 13.8
NKRFO15226 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.267e-7■■□□□ 13.8
NKRFO15226 SMAD2-210ENST00000587421 575 ntTSL 416.14■□□□□ 0.175e-8■■□□□ 13.8
NKRFO15226 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.395e-7■■□□□ 13.8
NKRFO15226 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.641e-24■■□□□ 13.8
NKRFO15226 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.545e-6■■□□□ 13.8
NKRFO15226 PPP1R12C-209ENST00000592993 2269 ntTSL 1 (best)23.31■■□□□ 1.325e-6■■□□□ 13.8
NKRFO15226 PPP1R12C-204ENST00000586992 4141 nt16.4■□□□□ 0.225e-6■■□□□ 13.8
NKRFO15226 KRTAP5-AS1-202ENST00000524947 570 ntTSL 422.77■■□□□ 1.245e-6■■□□□ 13.8
NKRFO15226 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.57■■□□□ 1.25e-6■■□□□ 13.8
NKRFO15226 ZNF331-206ENST00000504033 578 ntTSL 518.07■□□□□ 0.481e-6■■□□□ 13.8
NKRFO15226 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.142e-6■■□□□ 13.8
NKRFO15226 ZNF331-204ENST00000502248 670 ntTSL 1 (best)12.67□□□□□ -0.381e-6■■□□□ 13.8
NKRFO15226 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.461e-6■■□□□ 13.8
NKRFO15226 ZNF331-222ENST00000514374 574 ntTSL 49.45□□□□□ -0.91e-6■■□□□ 13.8
NKRFO15226 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.911e-6■■□□□ 13.8
NKRFO15226 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.061e-6■■□□□ 13.8
NKRFO15226 VAV2-205ENST00000486113 523 ntTSL 214.7□□□□□ -0.061e-6■■□□□ 13.8
NKRFO15226 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.865e-13■■□□□ 13.8
NKRFO15226 HINT1-209ENST00000513345 656 ntTSL 218.11■□□□□ 0.495e-13■■□□□ 13.8
NKRFO15226 HINT1-206ENST00000508495 825 ntTSL 1 (best)17.68■□□□□ 0.425e-13■■□□□ 13.8
NKRFO15226 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.95■□□□□ 0.145e-13■■□□□ 13.8
NKRFO15226 HINT1-204ENST00000506908 681 ntTSL 2 BASIC15.05■□□□□ -05e-13■■□□□ 13.8
NKRFO15226 HINT1-208ENST00000513012 583 ntTSL 4 BASIC12.85□□□□□ -0.355e-13■■□□□ 13.8
NKRFO15226 HINT1-207ENST00000511475 923 ntTSL 311.85□□□□□ -0.515e-13■■□□□ 13.8
NKRFO15226 HINT1-203ENST00000506207 369 ntTSL 56.47□□□□□ -1.375e-13■■□□□ 13.8
NKRFO15226 HINT1-202ENST00000504202 619 ntTSL 54.49□□□□□ -1.695e-13■■□□□ 13.8
NKRFO15226 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.35□□□□□ -1.072e-6■■□□□ 13.8
NKRFO15226 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.148e-7■■□□□ 13.8
NKRFO15226 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.278e-7■■□□□ 13.8
NKRFO15226 AKT1-215ENST00000555926 553 ntTSL 322.72■■□□□ 1.231e-6■■□□□ 13.8
NKRFO15226 MAFK-202ENST00000403150 2773 ntTSL 224.63■■□□□ 1.534e-7■■□□□ 13.8
NKRFO15226 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.952e-7■■□□□ 13.8
NKRFO15226 ZNF337-203ENST00000481610 572 ntTSL 37.5□□□□□ -1.212e-7■■□□□ 13.8
NKRFO15226 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.011e-6■■□□□ 13.8
NKRFO15226 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.241e-6■■□□□ 13.8
NKRFO15226 MAD1L1-215ENST00000464742 449 ntTSL 518.52■□□□□ 0.566e-7■■□□□ 13.8
NKRFO15226 MAD1L1-222ENST00000491858 494 ntTSL 415.14■□□□□ 0.016e-7■■□□□ 13.8
NKRFO15226 ANKRD11-213ENST00000567736 2750 ntTSL 216.79■□□□□ 0.281e-7■■□□□ 13.8
NKRFO15226 OSBPL2-208ENST00000618509 582 ntTSL 416.36■□□□□ 0.213e-6■■□□□ 13.7
NKRFO15226 ASPSCR1-204ENST00000577733 5503 ntTSL 217.46■□□□□ 0.392e-11■■□□□ 13.7
NKRFO15226 TRAF4-215ENST00000584944 825 ntTSL 215.77■□□□□ 0.121e-7■■□□□ 13.7
NKRFO15226 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.69□□□□□ -1.823e-6■■□□□ 13.7
NKRFO15226 AHNAK-207ENST00000531324 579 ntAPPRIS ALT2 TSL 321.53■■□□□ 1.043e-6■■□□□ 13.7
NKRFO15226 AHNAK-204ENST00000528508 568 ntAPPRIS ALT2 TSL 415.62■□□□□ 0.093e-6■■□□□ 13.7
NKRFO15226 AHNAK-206ENST00000530285 580 ntAPPRIS ALT2 TSL 315.52■□□□□ 0.083e-6■■□□□ 13.7
NKRFO15226 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.422e-6■■□□□ 13.7
NKRFO15226 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.21■□□□□ 0.677e-7■■□□□ 13.7
NKRFO15226 AIFM3-213ENST00000479523 562 ntTSL 422.52■■□□□ 1.24e-7■■□□□ 13.7
NKRFO15226 C7orf50-207ENST00000488073 853 ntTSL 521■□□□□ 0.952e-6■■□□□ 13.7
NKRFO15226 MIDN-205ENST00000591302 523 ntTSL 222■■□□□ 1.118e-7■■□□□ 13.7
NKRFO15226 DMTN-216ENST00000520174 1057 ntTSL 519.87■□□□□ 0.778e-7■■□□□ 13.7
NKRFO15226 DMTN-210ENST00000517804 813 ntTSL 518.77■□□□□ 0.68e-7■■□□□ 13.7
NKRFO15226 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.452e-20■■□□□ 13.7
NKRFO15226 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.791e-6■■□□□ 13.7
NKRFO15226 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.631e-6■■□□□ 13.7
NKRFO15226 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.541e-8■■□□□ 13.7
NKRFO15226 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.212e-6■■□□□ 13.7
NKRFO15226 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.071e-6■■□□□ 13.7
NKRFO15226 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.471e-6■■□□□ 13.7
NKRFO15226 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.271e-6■■□□□ 13.7
NKRFO15226 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.421e-6■■□□□ 13.7
NKRFO15226 DGAT1-207ENST00000531896 981 ntTSL 328.86■■■□□ 2.217e-8■■□□□ 13.7
NKRFO15226 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.99■■□□□ 1.917e-8■■□□□ 13.7
NKRFO15226 DGAT1-204ENST00000525371 840 ntTSL 524.05■■□□□ 1.447e-8■■□□□ 13.7
NKRFO15226 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.47e-8■■□□□ 13.7
Retrieved 100 of 9,198 protein–RNA pairs in 270.3 ms