Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.21■□□□□ 0.67
NPIPB4C9JG80 AC024257.2-201ENST00000549699 147 ntBASIC19.21■□□□□ 0.67
NPIPB4C9JG80 AC133561.4-201ENST00000566112 224 ntBASIC19.21■□□□□ 0.67
NPIPB4C9JG80 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.21■□□□□ 0.67
NPIPB4C9JG80 AC233992.3-201ENST00000607491 485 ntBASIC19.21■□□□□ 0.67
NPIPB4C9JG80 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
NPIPB4C9JG80 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPIPB4C9JG80 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPIPB4C9JG80 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPIPB4C9JG80 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NPIPB4C9JG80 AC244015.2-201ENST00000616358 1861 ntBASIC19.18■□□□□ 0.66
NPIPB4C9JG80 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 FBXW4P1-201ENST00000426721 2239 ntBASIC19.17■□□□□ 0.66
NPIPB4C9JG80 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
NPIPB4C9JG80 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 AC106739.1-201ENST00000617035 715 ntBASIC19.16■□□□□ 0.66
NPIPB4C9JG80 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NPIPB4C9JG80 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 EDA-201ENST00000338901 1233 ntBASIC19.15■□□□□ 0.66
NPIPB4C9JG80 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NPIPB4C9JG80 IGHV3-19-201ENST00000521488 291 ntBASIC19.15■□□□□ 0.66
NPIPB4C9JG80 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms