Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AC087623.3-201ENST00000607047 1098 ntBASIC17.08■□□□□ 0.32
LINC01548A6NM66 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC01548A6NM66 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC01548A6NM66 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC01548A6NM66 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LINC01548A6NM66 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01548A6NM66 AC127496.7-201ENST00000625110 1798 ntBASIC17.07■□□□□ 0.32
LINC01548A6NM66 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC01548A6NM66 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01548A6NM66 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LINC01548A6NM66 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.07■□□□□ 0.32
LINC01548A6NM66 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01548A6NM66 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LINC01548A6NM66 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01548A6NM66 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01548A6NM66 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01548A6NM66 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC01548A6NM66 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 OR7E47P-201ENST00000546390 1422 ntBASIC17.06■□□□□ 0.32
LINC01548A6NM66 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC01548A6NM66 AC027612.3-201ENST00000413684 1047 ntBASIC17.06■□□□□ 0.32
LINC01548A6NM66 AC097381.1-201ENST00000429019 1296 ntBASIC17.06■□□□□ 0.32
LINC01548A6NM66 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC01548A6NM66 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LINC01548A6NM66 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.06■□□□□ 0.32
LINC01548A6NM66 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LINC01548A6NM66 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC01548A6NM66 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01548A6NM66 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC01548A6NM66 BX005040.4-201ENST00000637145 1518 ntBASIC17.06■□□□□ 0.32
LINC01548A6NM66 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LINC01548A6NM66 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01548A6NM66 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01548A6NM66 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
LINC01548A6NM66 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01548A6NM66 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LINC01548A6NM66 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01548A6NM66 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 MIR6821-201ENST00000617625 74 ntBASIC17.05■□□□□ 0.32
LINC01548A6NM66 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01548A6NM66 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC01548A6NM66 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
LINC01548A6NM66 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LINC01548A6NM66 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LINC01548A6NM66 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LINC01548A6NM66 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC01548A6NM66 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.04■□□□□ 0.32
LINC01548A6NM66 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC01548A6NM66 GUSBP5-202ENST00000510805 1989 ntBASIC17.04■□□□□ 0.32
LINC01548A6NM66 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01548A6NM66 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 YBX1P1-201ENST00000445822 960 ntBASIC17.03■□□□□ 0.32
LINC01548A6NM66 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC01548A6NM66 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.03■□□□□ 0.32
LINC01548A6NM66 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 AP004607.7-201ENST00000527152 1677 ntBASIC17.03■□□□□ 0.32
LINC01548A6NM66 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC01548A6NM66 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms