Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.36■□□□□ 0.37
Smim17A0A504 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.36■□□□□ 0.37
Smim17A0A504 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim17A0A504 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smim17A0A504 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim17A0A504 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim17A0A504 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim17A0A504 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim17A0A504 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smim17A0A504 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Smim17A0A504 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smim17A0A504 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.35■□□□□ 0.37
Smim17A0A504 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Smim17A0A504 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smim17A0A504 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.35■□□□□ 0.37
Smim17A0A504 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Smim17A0A504 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim17A0A504 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smim17A0A504 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim17A0A504 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim17A0A504 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim17A0A504 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Smim17A0A504 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.34■□□□□ 0.37
Smim17A0A504 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim17A0A504 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.34■□□□□ 0.37
Smim17A0A504 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smim17A0A504 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim17A0A504 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim17A0A504 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.34■□□□□ 0.37
Smim17A0A504 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim17A0A504 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smim17A0A504 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim17A0A504 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim17A0A504 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.33■□□□□ 0.37
Smim17A0A504 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Smim17A0A504 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim17A0A504 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim17A0A504 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.33■□□□□ 0.37
Smim17A0A504 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim17A0A504 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smim17A0A504 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim17A0A504 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim17A0A504 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim17A0A504 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim17A0A504 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smim17A0A504 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.33■□□□□ 0.36
Smim17A0A504 Fst-202ENSMUST00000223640 2612 ntBASIC17.33■□□□□ 0.36
Smim17A0A504 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim17A0A504 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smim17A0A504 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.32■□□□□ 0.36
Smim17A0A504 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Smim17A0A504 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.32■□□□□ 0.36
Smim17A0A504 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Smim17A0A504 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim17A0A504 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smim17A0A504 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smim17A0A504 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smim17A0A504 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.31■□□□□ 0.36
Smim17A0A504 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smim17A0A504 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Smim17A0A504 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.31■□□□□ 0.36
Smim17A0A504 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smim17A0A504 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Smim17A0A504 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.31■□□□□ 0.36
Smim17A0A504 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim17A0A504 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms