Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav9n-4A0A075B631 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav9n-4A0A075B631 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9n-4A0A075B631 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Golgb1-201ENSMUST00000023534 498 ntBASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9n-4A0A075B631 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9n-4A0A075B631 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9n-4A0A075B631 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9n-4A0A075B631 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9n-4A0A075B631 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9n-4A0A075B631 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms