Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Gm9870-201ENSMUST00000063874 645 ntBASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-6A0A075B603 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Mir6236-201ENSMUST00000184437 123 ntBASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-6A0A075B603 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.21□□□□□ -0.14
Trav6-6A0A075B603 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Trav6-6A0A075B603 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Trav6-6A0A075B603 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trav6-6A0A075B603 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.21□□□□□ -0.14
Trav6-6A0A075B603 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-6A0A075B603 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-6A0A075B603 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-6A0A075B603 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Gm5812-201ENSMUST00000061073 957 ntBASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-6A0A075B603 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-6A0A075B603 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms