Protein–RNA interactions for Protein: Q9WTN3

Srebf1, Sterol regulatory element-binding protein 1, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf1Q9WTN3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Srebf1Q9WTN3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Srebf1Q9WTN3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Srebf1Q9WTN3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.62■■□□□ 1.53
Srebf1Q9WTN3 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.62■■□□□ 1.53
Srebf1Q9WTN3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Srebf1Q9WTN3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Srebf1Q9WTN3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Srebf1Q9WTN3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.58■■□□□ 1.53
Srebf1Q9WTN3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Srebf1Q9WTN3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.57■■□□□ 1.52
Srebf1Q9WTN3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Srebf1Q9WTN3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Srebf1Q9WTN3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Srebf1Q9WTN3 Gm24970-201ENSMUST00000175582 82 ntBASIC24.53■■□□□ 1.52
Srebf1Q9WTN3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.53■■□□□ 1.52
Srebf1Q9WTN3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Srebf1Q9WTN3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Srebf1Q9WTN3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Srebf1Q9WTN3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Srebf1Q9WTN3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.49■■□□□ 1.51
Srebf1Q9WTN3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Srebf1Q9WTN3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Srebf1Q9WTN3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.47■■□□□ 1.51
Srebf1Q9WTN3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Srebf1Q9WTN3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Srebf1Q9WTN3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.44■■□□□ 1.5
Srebf1Q9WTN3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.44■■□□□ 1.5
Srebf1Q9WTN3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.42■■□□□ 1.5
Srebf1Q9WTN3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Srebf1Q9WTN3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Srebf1Q9WTN3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Srebf1Q9WTN3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
Srebf1Q9WTN3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Srebf1Q9WTN3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Srebf1Q9WTN3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Srebf1Q9WTN3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Srebf1Q9WTN3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Srebf1Q9WTN3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.35■■□□□ 1.49
Srebf1Q9WTN3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Srebf1Q9WTN3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Srebf1Q9WTN3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Srebf1Q9WTN3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Srebf1Q9WTN3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Srebf1Q9WTN3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Srebf1Q9WTN3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.32■■□□□ 1.48
Srebf1Q9WTN3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Srebf1Q9WTN3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Srebf1Q9WTN3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Srebf1Q9WTN3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Srebf1Q9WTN3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Srebf1Q9WTN3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.29■■□□□ 1.48
Srebf1Q9WTN3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
Srebf1Q9WTN3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Srebf1Q9WTN3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.25■■□□□ 1.47
Srebf1Q9WTN3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Srebf1Q9WTN3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Srebf1Q9WTN3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.24■■□□□ 1.47
Srebf1Q9WTN3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Srebf1Q9WTN3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Srebf1Q9WTN3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Srebf1Q9WTN3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Srebf1Q9WTN3 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.19■■□□□ 1.46
Srebf1Q9WTN3 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.19■■□□□ 1.46
Srebf1Q9WTN3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Srebf1Q9WTN3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Srebf1Q9WTN3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Srebf1Q9WTN3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.18■■□□□ 1.46
Srebf1Q9WTN3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Srebf1Q9WTN3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.17■■□□□ 1.46
Srebf1Q9WTN3 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.17■■□□□ 1.46
Srebf1Q9WTN3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.16■■□□□ 1.46
Srebf1Q9WTN3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Srebf1Q9WTN3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Srebf1Q9WTN3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Srebf1Q9WTN3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Srebf1Q9WTN3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
Srebf1Q9WTN3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Srebf1Q9WTN3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Srebf1Q9WTN3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Srebf1Q9WTN3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Srebf1Q9WTN3 Gm8503-201ENSMUST00000118131 455 ntBASIC24.13■■□□□ 1.45
Srebf1Q9WTN3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Srebf1Q9WTN3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
Srebf1Q9WTN3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Srebf1Q9WTN3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Srebf1Q9WTN3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Srebf1Q9WTN3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Srebf1Q9WTN3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Srebf1Q9WTN3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.08■■□□□ 1.45
Srebf1Q9WTN3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Srebf1Q9WTN3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Srebf1Q9WTN3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Srebf1Q9WTN3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Srebf1Q9WTN3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Srebf1Q9WTN3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Srebf1Q9WTN3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Srebf1Q9WTN3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.03■■□□□ 1.44
Srebf1Q9WTN3 Gm6821-201ENSMUST00000107540 542 ntBASIC24.03■■□□□ 1.44
Srebf1Q9WTN3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.02■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms